Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0804 ATGAGAGACCTTTGCAGAAACTTCCAGCGTGGCAGCTGTCAATACGGAGATAGGTGTAAATTTATACATGCTGTGGCACAACAAGGGAAGCCTAATAATAGTTTTCATGGTTTTGGGGGACAGAATAGTTTTTACCAACAGCAACAGCAACAGCAAAATGTTAACCCTTTTGGATTTGGGTCTAAATCTGCTTCACAACCACACCAACAGCAGCAAAAGACCAATCCTTTTGGCTTTGGGGTGCAGAACAACATCAACAACTCACAATTCAAAGGGACCCCTCAACAGAACCAATTTAAGCCTTTTGAAAACAAATGGACTTGGGGTGGCGCTTCGCGGCAATCTGATAACAACCCCCTACCGGCGAATCATGAATGTACAGATCCTGAGGTCTGCAAGCGCCAGATTGCTGAAGATTTCAAGCAAGAGAGGCCACTCTGGATACTTACATGCTATGGTCATTCTAAAGGTGCACCTTGTGACATAGTTGGTGATATTAGCTATGAAGAACTGAGGGCAGCAGCTTATGAGGATGCGAAGCGAGGGATGAACTTGCAATCAATTGTTGAGAGAGAGAGAAATACACTGAATTCCAAGTTGGCTGAGTTCGAGAAACTACTTTCTGAACCCTACAGAATGCCATTTAATCCTGCTGTTAACAGTCAAAATCATCAGAATGCAAATCCGTTTTCAATGCCTATGCAAAATAATGGCCAGCATAATGCAAATCCATTTTCAATAACTACACAAAACAATGGTCCTGTGTCAGTCTCAAGCTTTAGCCAACTGGGTGCTTCATTGAACACGGGATTTGATAGGCCCTCTGCACAAGCACCGAACACTCCGCCACAGTCTAGTTTCTTCGGAAGTGGAGGAAACACTTTTACACCCAACACTGCAAACATAAGTGGCAGAGGCTTCTCAGGTGCTCCAAGCAGCCCCTTCTCTACCCCAGCGGAGTCAACAATGTTCCCGAGTTCAACTTCTCAGCAGTCATCCTTTGGCTTCAATGACTTGAGCTCCACTCCAATGTTTCAGACTACACCAGATGTTCAATCTTCAAGCATGTCCCAGGGAGAGAATGTTTCAACAGATCTCAGTATTTGGTTAAAAGAGAAATGGAATCCTGGAGAGATTCCCGAAGAAGCTCCTCCAGATTCAGTTGTTCGGTAG 1173 0.445 MRDLCRNFQRGSCQYGDRCKFIHAVAQQGKPNNSFHGFGGQNSFYQQQQQQQNVNPFGFGSKSASQPHQQQQKTNPFGFGVQNNINNSQFKGTPQQNQFKPFENKWTWGGASRQSDNNPLPANHECTDPEVCKRQIAEDFKQERPLWILTCYGHSKGAPCDIVGDISYEELRAAAYEDAKRGMNLQSIVERERNTLNSKLAEFEKLLSEPYRMPFNPAVNSQNHQNANPFSMPMQNNGQHNANPFSITTQNNGPVSVSSFSQLGASLNTGFDRPSAQAPNTPPQSSFFGSGGNTFTPNTANISGRGFSGAPSSPFSTPAESTMFPSSTSQQSSFGFNDLSSTPMFQTTPDVQSSSMSQGENVSTDLSIWLKEKWNPGEIPEEAPPDSVVR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0804 390 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Ahy3g0804 390 SUPERFAMILY CCCH zinc finger 3 26 IPR036855 GO:0046872
Ahy3g0804 390 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Ahy3g0804 390 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 69 388 - -
Ahy3g0804 390 MobiDBLite consensus disorder prediction 268 362 - -
Ahy3g0804 390 PANTHER MAKORIN-RELATED 2 66 IPR045072 -
Ahy3g0804 390 PANTHER MAKORIN-RELATED 69 388 IPR045072 -
Ahy3g0804 390 Gene3D - 1 75 - -
Ahy3g0804 390 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2 23 IPR000571 GO:0046872
Ahy3g0804 390 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 66 - -
Ahy3g0804 390 Coils Coil 189 209 - -
Ahy3g0804 390 MobiDBLite consensus disorder prediction 54 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0804 Ahy-Chr3 9020785 9024611 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy3g0804 zf-CCCH 1.60E-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0804 K14321 - gmx:100814339 459.914