Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0798 ATGGGGAGATCACGAAGTGGTTATGATGAGAGTGGGTTGAAGAAAGGTCCATGGACACCGGAAGAGGATAGAATATTGGTGGATTACATAAACAAAAACGGCCATGGAAGTAATTGGCGAGCGCTTCCTAAGATTGCAGGTTTAAACAGATGTGGAAAGAGTTGCAGGCTGAGGTGGACTAACTACCTCAGGCCTGATATCAAGAGAGGAAAATTCTCTCAAGAAGAAGAGAAACTCATCATCAACTTACATCAACTTCTTGGCAATAAGTGGTCAGCAATAGCAAGTCATCTACCAGGAAGAACTGACAATGAAATCAAGAATTTCTGGAACACTAATCTTAGAAAGAAGCTTCTAAGAATGGGGTTAGATCCAGTGACTCATCGTCCAAGATTAGATCATAATCATAATCATAATCAACTTCAACTTCTTTCCAATCTTCAACACTTGCTTCTTGCTGCAAACATTCTCAACAATAACAACAATAATAATCCTCTATTAAGTACTCTTCTTATTAACTCTGATAATGCCAAACTCCAAATCCTCCAAAACATGCTTCAAATCCTTGCTACTACTACTACTAATAATAATAATCTTGCACCAAACTTGGAGCCACTACTCAATCATCAACAATTTGGTCCATTAACCTCATCATCATCATCATCATCAGTTCCAAATGGTTTTTATGAATCTTTAGGGTTGAATGAATCTATGCTCCAAAACCTTATTTGCAGTAATGATTCTTTCCCTTGTCAAAATCAGCCCAATTTCCAAAACTTTGAAGCTCCTCCTCATGATGATAATGTTAATAATAATAATGAGAAAGTTGTTGTTGATGGCACAAATTCTTCTTCTCCTACAACACCATTGAATTGTTATTCACTTCCAAATCTGGTTTCAGCCTCATCACCTCATCATGCATGTTCCAACAAAGTAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTCTCCAACTTCAACCAACAACTTTGAAATGTGGGCAGATTTCATGTATGAGGAAGCAAGTGATGCTTATTGGAAACACATCATAGAGTAA 1101 0.347 MGRSRSGYDESGLKKGPWTPEEDRILVDYINKNGHGSNWRALPKIAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEKLIINLHQLLGNKWSAIASHLPGRTDNEIKNFWNTNLRKKLLRMGLDPVTHRPRLDHNHNHNQLQLLSNLQHLLLAANILNNNNNNNPLLSTLLINSDNAKLQILQNMLQILATTTTNNNNLAPNLEPLLNHQQFGPLTSSSSSSSVPNGFYESLGLNESMLQNLICSNDSFPCQNQPNFQNFEAPPHDDNVNNNNEKVVVDGTNSSSPTTPLNCYSLPNLVSASSPHHACSNKVNNNNNNNNNNNNNNNNNNNNNNNNNSPTSTNNFEMWADFMYEEASDAYWKHIIE* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0798 366 SMART sant 68 116 IPR001005 -
Ahy3g0798 366 SMART sant 14 65 IPR001005 -
Ahy3g0798 366 CDD SANT 17 63 IPR001005 -
Ahy3g0798 366 Gene3D - 71 118 - -
Ahy3g0798 366 Gene3D - 8 68 - -
Ahy3g0798 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 365 - -
Ahy3g0798 366 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Ahy3g0798 366 MobiDBLite consensus disorder prediction 303 342 - -
Ahy3g0798 366 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Ahy3g0798 366 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 2 365 - -
Ahy3g0798 366 CDD SANT 71 114 IPR001005 -
Ahy3g0798 366 MobiDBLite consensus disorder prediction 255 286 - -
Ahy3g0798 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Ahy3g0798 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Ahy3g0798 366 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Ahy3g0798 366 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Ahy3g0798 366 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0798 Ahy-Chr3 8993082 8994540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0798 1 366 MYB Transcription Factor Family AT5G16770 46.361 7.93e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g0798 Myb_DNA-binding 1.50E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0798 K09422 - gmx:547488 317.005