Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0766 ATGGAAGATGGAAAGCATAAATCAAGGAGAGAAGATTCCGAAGTGAAGGAAGATGATTCCAAGAGGAGCCACCGTGACAGGGGCGGGGAAAAGGACAAGGATAGAAGCAATGGGAAGCATAGGGATAGGGAGAAGAGGGACCGCGACCGGGATAGCAGAAGGCATGATAGAGATCATAGTAGTGATGAGTCTGATGATAGGTATGAGAGGGAGAGGGAGAGGGAGAGGGAGAAGGAGAAGGAGAAGGAGAAGCGCAGAGATAAAGACAAGGAAGAAAGAAGAGCTCGCGAGAAGAAAAGAGAAAGGGAAAGGGAAAGGGAAAAGGAAAGGGAGAGGGAAGAAAAGGAGAGGGAAAGGAGAGAAAGGGCGAAGGAGAAAGAAAGAGAGAGAGAAAGAGAAAGAGAAAGGAGGGAAGATAGAGAGAGGGAGCGGGAGAGGGAACGTGAGCGTGAAAAGGATAAGGATAGAAGGGAGCGTGAGAGAGAGAAGGAAAATGAAAGAGAAAGGGGGAGGAGAGTGCGCGACCGGGAGAAGCGTAGGGAAGTTGATAGTGATTATAGTGATGATGATTCCAGGGAGAGGGAGAGAGACAGGAAGCGGCACAAGAAAGAGGATGATGATTATAAGGGGAGAGACAAGGAAAGGAGTTCTGGCAAGTCACATAAGCATACTGAGGATATTGAAGGTAGCCCAAGAAGAAAGAGTGTGGAAGATGACTCGGATGCCAAGGTGAAGGAGAGAAAACCTACTCATGAAGAGGAGATAGAGGAAGAACACAAGAGATTGGATGAAGAAATGGAAAAGAGGAGGAGAAGAGTTCAGGAGTGGCAAGAGCTGAGGAGGAAGAAGGAAGAAGCTGAGAGAGAAAAGCAGGGTGAAGCAAGTGCTAGTGAACCAAAGTTGGGAAAGGCCTGGACCCTTGAAGGGGAATCTGACGATGAAGAAGCAACTGGTACAGGGAAGCCAGATACTGCGATGGATGTAGATGAAGATGAAAAACCTGTTGATAAAGAACCTGGGGATCCTATGGTGGCAGATGGTGATAATGGGGCAGTTACGTCTGATTTACAAGATGGAACTGCTGGTGCTCCTGAGGATGAGGAAATTGATCCATTGGATGCCTTCATGAATTCTATGGTTCTACCTGAAGTTGAAAAGCTGAACAACACTGTTTGCTCTTCAATACCTGATAAAACTAATGACAAGAAACTCAAGGATAGAGGGGATGAGCAGGGTCGTAGTGGACAGGCAAGGAAAGTTTCCAATAATAAATCGATTGGAAGAATAATTCCTGGTGAAGACTCTGACTCTGATTATTCAGATCTTCAAGTTGACGATGACGACATTGAAGAAAATGATGAGGAGTTTATGAAAAGAGTGAAGAAGTCAAAAGCTGATAAGCTGTCTATAGTTGACCATTCAAAGATTGATTATCAACCTTTCAAGAAAAATTTCTACATTGAAGTGAAGGATGTCTCGAGGATGACTCCTGAAGAAGTTGCTGCATACCGGAAGGAGCTGGAGTTGAAGATACATGGAAAGGATGTTCCAAAGCCAGTAAAATCATGGCATCAGACTGGACTTACTAGCAAAATTTTAGAGACAATAAGAAAGCTTAACTATGAAAAGCCGATGCCTATTCAAGCCCAGGCACTGCCTGTAATAATGAGTGGTCGAGACTGCATTGGTATTGCTAAAACTGGATCAGGCAAAACACTTGCTTTTGTTTTGCCTATGTTGAGGCACATCAAGGATCAGCCACCAGTTGTTACTGGAGATGGACCAATTGGGCTTATCATGGCTCCTACAAGGGAGCTTGTTCAACAGATTTACAGTGATATAAAGAAGTTTGGGAAGGTACTGGGTCTAAGATGTGTACCTGTGTATGGAGGTTCTGGTGTTGCTCAACAAATTAGTGAGTTGAAGCGTGGAGCTGAGATAGTGGTTTGTACTCCAGGTAGGATGATTGACATACTATGTACCAGTGGTGGCAAAATAACTAACCTGCGCAGGGTTACTTATTTGGTCATGGATGAGGCTGATAGAATGTTTGACATGGGGTTTGAACCCCAAATCACAAGAATTGTTCAGAATATCCGACCAGATCGTCAAACTGTTCTATTTTCTGCCACTTTCCCCCGCCAGGTTGAAATTCTCGCCCGCAAGGTTCTAAATAAACCTGTTGAAATACAAGTTGGTGGCAGAAGTGTTGTGAACAAGGACATAACACAGCTGGTGGAGTTGAGACCAGAAAAAGAAAGATTTCATAGGCTATTAGAGATATTGGGTGAATGGTATGAGAAAGGAAAGATTTTGATTTTTGTCCAGTCACAGGAAAAATGTGATGCTTTGTTCAAGGATTTGCTAAAGTCTGGTTATCCTTGCTTATCTCTTCATGGAGCTAAGGACCAGACAGATCGTGAATCCACAATTGCTGATTTCAAAAGCAATGTCTGCAACATGTTGATTGCAACTAGTATTGCTGCCAGGGGACTAGATGTCAAGGAGCTTGAATTGGTTATCAATTTTGATGTTCCTAATCACTATGAAGATTATGTTCATCGTGTTGGCCGCACTGGCAGAGCAGGCCGAAAGGGTTGCGCTATTACTTTTATTTCAGAGGAAGAAGCAAGATATGCACCTGATTTGGCAAAAGCATTGGAGCTATCTGAGCAAGTTGTTCCTGATGACCTGAAGGCACTTGCTGATGGCTTTATGGCAAAAGTGAAACAAGGGCTTGAGCAGGCTCATGGAACTGGTTATGGAGGCAGTGGCTTTAAATTTAATGAAGAAGAAGATGAGGAGAGGAGAGCAGCGAAGAAAGCTCAAGCCAAGGGATATGGGTTTGAAGAGGATAAATCAGATTCGGAAGATGAAGATGAAAATATTAGGAAGTCGGGAGGTGACATCTCACAGCTTGCTCATATTCTTGCTGCCTCAAAAGGCACTGTCCCTGCTATACCTAGCCCCATCTCTCCTGCTCAGCTGATTTCTAATGGTGGACTAACTGTTCCGTTGCCAGCTGTTCTTGGTAATCTCCAAACTACTACAGTTTTGCCTACAGGGCTTCCCCTTACTACAAATGATGGGGCAGCTCGGGCAGCATTAGCTGCTATTAACCTGCAGCACAACTTAGCTAAGATACAGTCTGAAGCATTGCCTGAGCATTATGAAGCTGAACTAGAGATAAATGATTTCCCCCAAAGTGCTCGGTGGAAAGTCACACACAAGGAAACTTTGGGTCCAATTTCTGAGTGGACAGGAGCCGCTATTACCACCAGGGGACAATATTTCCCACCTGGTAAAATCGCGGGACCTGGGGAACGCAAGCTCTACTTGTTCATTGAGGGTCCTAGTGAGCAGTCTGTTAAGAGAGCTAAAGCAGAGTTGAAGCGTGTTTTGGAAGACATCACAAATCAAGCTTTACAACTTCCTGGTGGATCTCAACCTGGCAAATACTCTGTTGTTTAA 3471 0.444 MEDGKHKSRREDSEVKEDDSKRSHRDRGGEKDKDRSNGKHRDREKRDRDRDSRRHDRDHSSDESDDRYEREREREREKEKEKEKRRDKDKEERRAREKKREREREREKEREREEKERERRERAKEKERERERERERREDREREREREREREKDKDRREREREKENERERGRRVRDREKRREVDSDYSDDDSRERERDRKRHKKEDDDYKGRDKERSSGKSHKHTEDIEGSPRRKSVEDDSDAKVKERKPTHEEEIEEEHKRLDEEMEKRRRRVQEWQELRRKKEEAEREKQGEASASEPKLGKAWTLEGESDDEEATGTGKPDTAMDVDEDEKPVDKEPGDPMVADGDNGAVTSDLQDGTAGAPEDEEIDPLDAFMNSMVLPEVEKLNNTVCSSIPDKTNDKKLKDRGDEQGRSGQARKVSNNKSIGRIIPGEDSDSDYSDLQVDDDDIEENDEEFMKRVKKSKADKLSIVDHSKIDYQPFKKNFYIEVKDVSRMTPEEVAAYRKELELKIHGKDVPKPVKSWHQTGLTSKILETIRKLNYEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVTGDGPIGLIMAPTRELVQQIYSDIKKFGKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVELRPEKERFHRLLEILGEWYEKGKILIFVQSQEKCDALFKDLLKSGYPCLSLHGAKDQTDRESTIADFKSNVCNMLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEEARYAPDLAKALELSEQVVPDDLKALADGFMAKVKQGLEQAHGTGYGGSGFKFNEEEDEERRAAKKAQAKGYGFEEDKSDSEDEDENIRKSGGDISQLAHILAASKGTVPAIPSPISPAQLISNGGLTVPLPAVLGNLQTTTVLPTGLPLTTNDGAARAALAAINLQHNLAKIQSEALPEHYEAELEINDFPQSARWKVTHKETLGPISEWTGAAITTRGQYFPPGKIAGPGERKLYLFIEGPSEQSVKRAKAELKRVLEDITNQALQLPGGSQPGKYSVV* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 398 414 - -
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 927 964 - -
Ahy3g0766 1156 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 521 549 IPR014014 GO:0003724
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 1 368 - -
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 388 443 - -
Ahy3g0766 1156 Coils Coil 248 296 - -
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 920 964 - -
Ahy3g0766 1156 CDD DEADc_DDX46 510 731 - -
Ahy3g0766 1156 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 197 976 - -
Ahy3g0766 1156 PANTHER LOW QUALITY PROTEIN: DEAD-BOX ATP-DEPENDENT RNA HELICASE 42-LIKE 197 976 - -
Ahy3g0766 1156 SMART helicmild6 782 863 IPR001650 -
Ahy3g0766 1156 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 741 902 IPR001650 -
Ahy3g0766 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 457 879 IPR027417 -
Ahy3g0766 1156 SMART ultradead3 540 745 IPR014001 -
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 1 296 - -
Ahy3g0766 1156 MobiDBLite consensus disorder prediction 305 343 - -
Ahy3g0766 1156 CDD SF2_C_DEAD 742 872 - -
Ahy3g0766 1156 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 552 730 IPR014001 -
Ahy3g0766 1156 Coils Coil 1120 1143 - -
Ahy3g0766 1156 Coils Coil 65 165 - -
Ahy3g0766 1156 Gene3D - 473 730 IPR027417 -
Ahy3g0766 1156 Gene3D - 731 905 IPR027417 -
Ahy3g0766 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 668 902 IPR027417 -
Ahy3g0766 1156 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 676 684 IPR000629 -
Ahy3g0766 1156 Pfam Helicase conserved C-terminal domain 755 863 IPR001650 -
Ahy3g0766 1156 Pfam DEAD/DEAH box helicase 546 717 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0766 Ahy-Chr3 8521250 8527251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0766 522 878 Eukaryotic Initiation Factors Gene Family AT3G13920 35.833 2.42e-55 197