Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0718 ATGGATTTCTTTGTTTGCTTCTCTCTGTTGCTTCTTCTTTCTTCATCTGCCACCGCTTGTGATCGTTGCGTCCACCAATCCAAGGCTTCTTTTTTCTCCAAAGCCTCTGCTCTGTCATCTGGGGCGTGTGGTTATGGTGAATTGGCACTGTCGTTAAGTGCTGGAAACCTTGCAGCTGCTGTTCCTTCCATCTTCAGAGATGGTGCTGCTTGTGGTGCGTGCTTCCAGATTAGATGCAAGGACCCAAAGCTCTGCACAAAATCAGGAACCAGAGTGGTTCTTACTGATCTTAACAAAGATAACAAAACTGATTTTGTTCTTAGCACCAGAGCCTTTCAATCTTTGGCTCTCAAAGGAAAATCTCAGTATCTTCTCAACCTTGGCATTCTTGACATTGAATACAAAAGGGTACCATGTGAGTACAAAAACAAGAACCTGGCTGTTCGCGTTGAAGAATCAAGCAAGAAGCCAAATTACTTGGCTATTAAATTTTTGTATCAAGGTGGTCAAACTGACATTGTAGCCGTTGATGTAGCTACGGTTGGGTCGTCAAATTGGAGTTTCCTAAGCAGAAATCATGGGGCGGTGTGGGACACAAGCAGGGTTCCAGAAGGGGCATTGCAGTTAAGGTTAGTTGTAACGGCAGGTTTTGATGGGAAGTGGATTTGGGCACAGAAAGAGGTTCTTCCGGCTGATTGGAAAAATGGTGTCATCTATGATTCTGGTGTTCAAATCACTGACATTGCTCAAGAAGGTTGTGCCACTTGCGATGATGGTTCATGGCCATGA 789 0.4461 MDFFVCFSLLLLLSSSATACDRCVHQSKASFFSKASALSSGACGYGELALSLSAGNLAAAVPSIFRDGAACGACFQIRCKDPKLCTKSGTRVVLTDLNKDNKTDFVLSTRAFQSLALKGKSQYLLNLGILDIEYKRVPCEYKNKNLAVRVEESSKKPNYLAIKFLYQGGQTDIVAVDVATVGSSNWSFLSRNHGAVWDTSRVPEGALQLRLVVTAGFDGKWIWAQKEVLPADWKNGVIYDSGVQITDIAQEGCATCDDGSWP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0718 262 Pfam Lytic transglycolase 59 134 IPR009009 -
Ahy3g0718 262 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Ahy3g0718 262 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576
Ahy3g0718 262 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Ahy3g0718 262 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Ahy3g0718 262 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Ahy3g0718 262 PANTHER EXPANSIN-LIKE A1-RELATED 7 258 - -
Ahy3g0718 262 PRINTS Major pollen allergen Lol pI signature 116 131 IPR005795 GO:0005576|GO:0019953
Ahy3g0718 262 PRINTS Major pollen allergen Lol pI signature 217 234 IPR005795 GO:0005576|GO:0019953
Ahy3g0718 262 PRINTS Major pollen allergen Lol pI signature 79 89 IPR005795 GO:0005576|GO:0019953
Ahy3g0718 262 PRINTS Major pollen allergen Lol pI signature 149 164 IPR005795 GO:0005576|GO:0019953
Ahy3g0718 262 PRINTS Major pollen allergen Lol pI signature 165 180 IPR005795 GO:0005576|GO:0019953
Ahy3g0718 262 SUPERFAMILY Barwin-like endoglucanases 10 143 IPR036908 -
Ahy3g0718 262 Gene3D - 12 140 IPR036908 -
Ahy3g0718 262 Pfam Expansin C-terminal domain 147 230 IPR007117 -
Ahy3g0718 262 SUPERFAMILY PHL pollen allergen 144 241 IPR036749 -
Ahy3g0718 262 Gene3D - 141 246 IPR036749 -
Ahy3g0718 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 241 IPR007117 -
Ahy3g0718 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Ahy3g0718 262 PANTHER EXPANSIN-B3 7 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0718 Ahy-Chr3 7788805 7790545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0718 3 256 Expansin Gene Family AT3G45960 63.672 8.28e-112 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0718 - - adu:107477263 493.812