Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0717 ATGTCCATGCACCCATATCACCATAACACACTCCAAACAACGTCACATGCCATTGTCCAATTCCACTTCCTATATATATATACACACAATTCAATCATACATCATCATCCTAACAAAATAATAAAAAATACAAGTATGGTTGTTGTTATTAGTGCAAAGAGGCTTATACAAATGGCAAGGAAGTGGCAGAAAATCGCAACATCTAAGCGCAAGACAATTTCATACCATCAAAGAAGAAACCAAGATGATTGTTATTATTCATCGGCGGCGGCGACGACGACGACAAACAAGGGTCACTTTGTAGTTTATAGTTTGGATGATAAGAGATTTGTGGTTCCATTGAAGTACCTTAGCACGAATGTGTTTAGGGAACTTCTTAAGTTGTCGGAGGAAGAGTTTGGGTTACCTTCGAACGGTCCAATTAGGTTACCATTTGATGGGGTTTTCTTGGACTATGTCATGTCTTTGTTGTTGCTTCAACAACGTAATGTTCCTCAAGATGTTGAGAAGGCATTGATTACTTCAATGGCTGCTTGTCACAGCCAAGCTTCTTCTTCTCATCATGATTATTGTTATTATGGTCTTAGGCAAAGCCATGAACAAACTACTATCTATGGCTTTTAA 624 0.383 MSMHPYHHNTLQTTSHAIVQFHFLYIYTHNSIIHHHPNKIIKNTSMVVVISAKRLIQMARKWQKIATSKRKTISYHQRRNQDDCYYSSAAATTTTNKGHFVVYSLDDKRFVVPLKYLSTNVFRELLKLSEEEFGLPSNGPIRLPFDGVFLDYVMSLLLLQQRNVPQDVEKALITSMAACHSQASSSHHDYCYYGLRQSHEQTTIYGF* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0717 207 Pfam Auxin responsive protein 53 157 IPR003676 GO:0009733
Ahy3g0717 207 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 50 207 - -
Ahy3g0717 207 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 50 207 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0717 Ahy-Chr3 7758413 7759182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0717 54 178 Calmodulin-binding Proteins AT2G24400 26.761 1.02e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0717 - - ahf:112769442 413.305