LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy3g0701	ATGGCAAGTTCTACTGTTCAGACCGACAAGGTTACCACTTTGGATAGCAACAAGTCTTCAAAGTCTAATTTTCTTTCTTTCATTGGAGCACATGAGATTTTCATGCCACTGACATGGGTGGCAGCGCTGAGAGAGCTAGTTCTCAACTGCATGTTAATGTTTATGCAAACAGGCTCAATATTGGGCTGCTTGGACTCAAATGAAGTTGATCCCCAACTGTTAGTCCCTGTTGTAATATTCATTCTATTATTTTTGCTCTTAATAAACACAATTCCATTCTCCGAATTTCACATGAGTTCCACTGTCACAGTAATAGCAACGTTAAAGAATGTTATTACTATAACACGTGGACTAATGTATATCATTGCACAGTGTATTGGTTCAATAACTGGTTTCATTATACTAAAATATGTAATGAATCCAAAATTACAAGAAAAATATTCATTTAAAAGCTGTGCAATTGGTGATGATCATAATATAAAACTAGGATCAAAGCCACTAGTTGCATTTTTTATAGAATTTTCATTCACATCTTTGGTGCTGTTTACTTTGGGATTTGACAAGAAAAAGTTAGAGAAATTAGGATTACCAAGGGTGTCTGCTGTGACTGCTGGAGCATTGGCATTGACAACATTTGCCTCTATAATTGTTACTGGATACCTAGGCAATGCTGGTGTTGGGTTTAATCCAACAAGGTGTTTGGGCCCCTTTGCTAAGAAATGGATTATTGGCGAATGA	738	0.3659	MASSTVQTDKVTTLDSNKSSKSNFLSFIGAHEIFMPLTWVAALRELVLNCMLMFMQTGSILGCLDSNEVDPQLLVPVVIFILLFLLLINTIPFSEFHMSSTVTVIATLKNVITITRGLMYIIAQCIGSITGFIILKYVMNPKLQEKYSFKSCAIGDDHNIKLGSKPLVAFFIEFSFTSLVLFTLGFDKKKLEKLGLPRVSAVTAGALALTTFASIIVTGYLGNAGVGFNPTRCLGPFAKKWIIGE*	246

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy3g0701	245	Pfam	Major intrinsic protein	42	236	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Ahy3g0701	245	SUPERFAMILY	Aquaporin-like	31	237	IPR023271	-
	Ahy3g0701	245	Gene3D	Glycerol uptake facilitator protein.	26	242	IPR023271	-
	Ahy3g0701	245	PRINTS	Major intrinsic protein family signature	116	135	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Ahy3g0701	245	PRINTS	Major intrinsic protein family signature	40	59	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Ahy3g0701	245	PRINTS	Major intrinsic protein family signature	210	232	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Ahy3g0701	245	PRINTS	Major intrinsic protein family signature	79	103	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Ahy3g0701	245	PANTHER	MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER	8	236	-	-
	Ahy3g0701	245	PANTHER	AQUAPORIN-LIKE	8	236	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy3g0701	Ahy-Chr3	7514198	7522675	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy3g0701	82	235	Major Intrinsic Protein MIP	AT3G54820	25.000	3.71e-07	48.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy3g0701	K09866		-	ahf:112789224	450.669