Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0682 ATGGTGATGACATTGCGGGGTTTGGTTGTGTTATCAAAAAGTCTGATGGTTTGTGGCAAAGGGGCTGCTGTGGAACACGATCTTTGCGATCTGGAGAGGGCTCCTCCTTGCCTGGGAGGAATATGCAAAATTGTTTCTCCTGTAATTGCTTCTATTCCTGCTGATGTTGTCTTAACGAAAGAGAATAAGAACTTCAGGTTTGAAACAAATGTGCAGCCTCTTCGGCTTTCTAAATGGAATGAGAAAAATATAATGAACTTTTCAATGAGTGGAAGAAAATACACATATCATGAATTTGAGGCTCTAGCAAATCAGGCTTTTATCGGTTCGGCCGATATGGAAAAAGAATTCTGGCATGAGATGGTGAACGGAGAGAAGGGAACCGTTGAGTACGGAGTCAATGTTGAGGGCAGTGCCTTTTCATGCCATCCTAATGACAAGCTTGGAAGAAGCAAATGGAATTTGAAGTATCAGAATTTTTCAAGACTGCCGCAATCTACATTGAGATTAGTTGGCAAAGAAATTCCAGGAATAACTGATCCTATGCTTTATATTGGGATGCTGTTCAGCATGTTTGCCTGGCATGTAGAAGATCATTACTTGTATAGCATAAATTATCACCATTCAGGTGCTAACAAAACTTGGTATGGAGTGCCTGCTCATGCAGCCTCTCAGTTTGAAAATGTTGTATTGCATCGTGTGTATAACCATGAAATCATGTTGAAACATGGCGAAGACGAGGCTTTCCAGCTTCTTGCGAATAAAACTACAATGTTCCCTCCAAATATATTGCTACAACATGGTGTCGCTGTTTACAAGGCTGTGCAGAAGCCAGGGGAGTTTGTCATCTCCTTTCCTAGAGCATATCATGCTGGATTTAGTCATGGTAATGTATCTATTTAG 903 0.4109 MVMTLRGLVVLSKSLMVCGKGAAVEHDLCDLERAPPCLGGICKIVSPVIASIPADVVLTKENKNFRFETNVQPLRLSKWNEKNIMNFSMSGRKYTYHEFEALANQAFIGSADMEKEFWHEMVNGEKGTVEYGVNVEGSAFSCHPNDKLGRSKWNLKYQNFSRLPQSTLRLVGKEIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGANKTWYGVPAHAASQFENVVLHRVYNHEIMLKHGEDEAFQLLANKTTMFPPNILLQHGVAVYKAVQKPGEFVISFPRAYHAGFSHGNVSI* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0682 300 Pfam JmjC domain, hydroxylase 182 296 IPR003347 -
Ahy3g0682 300 PANTHER TRANSCRIPTION FACTOR JUMONJI FAMILY PROTEIN 26 296 - -
Ahy3g0682 300 SUPERFAMILY Clavaminate synthase-like 144 297 - -
Ahy3g0682 300 SMART cupin_9 152 299 IPR003347 -
Ahy3g0682 300 Gene3D Cupin 32 299 - -
Ahy3g0682 300 PANTHER LYSINE-SPECIFIC DEMETHYLASE 26 296 - -
Ahy3g0682 300 ProSiteProfiles JmjC domain profile. 152 300 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0682 Ahy-Chr3 7235148 7238470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0682 147 296 C2H2 Transcription Factor Family AT5G04240 49.333 5.25e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy3g0682 JmjC 3.30E-34 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0682 - - ahf:112772233 623.624