Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0666 ATGAACAACAACTACACATATGAAACGGAAGATGAAGAAGACGAAGACGAAGAATCAGTGGAAGACGAAGAAGACGATGAATCACTGGAAGATGAAGAAGAAGAATCTCTGGAAGACGAAGAAGACGATGAATCACTGGAAGACGACGAAGACGATGAATCACTGGAAGATGAAGAAGAAGAATCTCTAGAAGAAGAACCTCTCGAAGAGGAAGAAGACGATGAATCACTGGAAGACGAAGAAGACGATGAATCACTGGAAGATGAAAAAGAAGAATCTCTGGAAGACGAAGAAGACGATGAATCACTGGAAGATGAAGAAGAAGAATCTCTAGAAGAATGCACCACATCACGAAAGAGAAGCCGCTTCACTACTTTGACCAAGTCAAACATCAAGAAGCTCCAAAAAACTAAAATCAATGAGGTATCATCTAATCTTTCGATAACAAAATCCGAGGCGTGCCTTTTGCTAATCCACCATGGTTGGAGCGCCACGAAGGTCGACGAGGCCTGGTTCGACGACAAAGAAAGAGTTCGGAAACTTGTTGGATTGCTCAAACACAACTCCGGAGAGATCGTAACAACCCAAACTTGTGAGATATGTTTTGATAATACGGTTTGCTTGGAGAAGAAGTTGAAATCCGCCAAGTGTGGCCACGCATACTGCGTCGATTGTTGGAAGCGCTACATCAATGAGAAGATCAAAGAAGGTCCTCATGAGTGCCTCAAGCCCATGAGATGTCCTCATCCATCTTGTGAGGCTTCTTTGGAGATTAACATGATTCGGCGATTCGCTAGCCAGCAAAACAGAAAGATGTACGATCGTTTCTTGTTACGATCTTATGTCGAAACAAGAAAGAATATAAAGTGGTGTCCAAGGCCTGATTGCGATCTTGCTGTTAGGTACAAATCAGATGGAAATTATGTTAACAAATATGTTGAAGTAAGTTGCAGGAATGGGCATAGGTTTTGCTGGGGATGCGGCGAAGATGCTCATAGACCCGTGAGTTGTGAAATGATGGCTCAGAAGAACCAAGAAAGTGGTGATTCTAAGAGCCTGCGTTGGATCTCTACTTTCACCAAGAAATGCCCTAGTTGTAAGCAACCCATTGAGAGGAACGGGGGTTGCATGCACGTAACATGCACTGTTTGCAGCTACCAATTTTGCTGGCTATGTCTTTCTGATTGGTTTCTGTGTTCCGCCCGTTGCAACCGTTTCTAG 1221 0.4357 MNNNYTYETEDEEDEDEESVEDEEDDESLEDEEEESLEDEEDDESLEDDEDDESLEDEEEESLEEEPLEEEEDDESLEDEEDDESLEDEKEESLEDEEDDESLEDEEEESLEECTTSRKRSRFTTLTKSNIKKLQKTKINEVSSNLSITKSEACLLLIHHGWSATKVDEAWFDDKERVRKLVGLLKHNSGEIVTTQTCEICFDNTVCLEKKLKSAKCGHAYCVDCWKRYINEKIKEGPHECLKPMRCPHPSCEASLEINMIRRFASQQNRKMYDRFLLRSYVETRKNIKWCPRPDCDLAVRYKSDGNYVNKYVEVSCRNGHRFCWGCGEDAHRPVSCEMMAQKNQESGDSKSLRWISTFTKKCPSCKQPIERNGGCMHVTCTVCSYQFCWLCLSDWFLCSARCNRF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0666 406 MobiDBLite consensus disorder prediction 7 111 - -
Ahy3g0666 406 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED 92 406 - -
Ahy3g0666 406 Gene3D - 333 406 - -
Ahy3g0666 406 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 92 406 IPR031127 GO:0004842|GO:0016567
Ahy3g0666 406 SUPERFAMILY RING/U-box 195 280 - -
Ahy3g0666 406 SUPERFAMILY RING/U-box 355 399 - -
Ahy3g0666 406 ProSiteProfiles Zinc finger RING-type profile. 198 248 IPR001841 -
Ahy3g0666 406 Pfam IBR domain, a half RING-finger domain 352 396 IPR002867 -
Ahy3g0666 406 Pfam IBR domain, a half RING-finger domain 272 337 IPR002867 -
Ahy3g0666 406 Coils Coil 77 106 - -
Ahy3g0666 406 SMART ibrneu5 271 337 IPR002867 -
Ahy3g0666 406 SMART ibrneu5 345 399 IPR002867 -
Ahy3g0666 406 ProSiteProfiles TRIAD supradomain profile. 194 406 IPR044066 -
Ahy3g0666 406 MobiDBLite consensus disorder prediction 1 118 - -
Ahy3g0666 406 SUPERFAMILY RING/U-box 273 342 - -
Ahy3g0666 406 Coils Coil 20 49 - -
Ahy3g0666 406 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 286 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0666 Ahy-Chr3 7108938 7110158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0666 121 396 ARIADNE family AT1G05890 43.110 1.87e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0666 K11968 - gmx:100801350 301.212