Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0657 ATGGCAAATCGAGCTTCAACTTCTGTGATCATGGCTACTAATTACGATGTCTTTCTGAGTTTCAGGGGTGAAGAGACACGTCATGGATTCACAGGTCATCTCTATGATGCTCTCTGCCGCAACGGAATCAACACCTTCATCGATGATGAGAATCTCAGAACAGGGGAAACAATTCGACCTCAACTCCTTCAATCCATTGAAGCCTCAAAGATCTCCATTATTGTTTTCTCAACAAACTATGCAGCTTCAACATGGTGCCTTGATGAACTCGTCCAGATCCTTCGGTGTCACAGGGAAAGGTACCAACTTGTGTTTCCAGTCTTCTACAAAGTAGAGCCCTCAGATGTACGGCATCAGAGGAACACTTACAAGGAAGCCGTGGATGCTCATGAAATCAGGTTTGGTTGTCACTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGGCAGAAACATCCAACATGAAAGGATTTCATTTGAAACAAGGGTATGAATTCAAGTTTATTCAAGAAATTGTATGCAAGGCATTGACTCATATACCTCCAAGACAATTACTTATTGAGGATCGTATGATTGGATTGCAAACTCGAGTTGTAGAAGTGGAGTCACATCTATATTCTTCGTACAGCACATCTAAGTACAGGATATTATCCAATATCAAATCATCCAAACCAAAGCTCTACAATAACAATACCATGTTAGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACGCTTGCCAAAGCCTTGTATAACTCCATCTGCGACCGGTTTGAATGTGCTTGTTTTCTTTTCAATGTTAGAAAAATTTCAGATCAAGAAGAGGGCCTAGTACGTCTACAGCAAACGCTCCTCTCAAAGTTGCTTGGGGAGTGGGAAATCAAGGTCCGCAGTGTCGAGGAAGGAATCAGTATGATCAAAGAGAAACTTGGCAAAAAAAGAGCTCTTATTGTTCTTGATGATGTTGATAAGATAGAACAATTAAAAGCATTGGCAGGAGAATGTGATTGGTTTAGTTACGGGACTCGAATTGTTATAACAAGGGATAAATATCTTCTAACAGCCCATAAAGTAGAAAAGATTTACAAGATGAAATTGCTAAGTGACCCTGAATCTCTAGAGCTCTTCTGTTGGAACGCCTTCAAAATGACAAGGCCCAAAGCAAACTATGAAGACCTATCCAATCAAGCAATACATTATGCCCAGGGCCTCCCATTAGCCTTAAAGGTTATAGGCTCTAATTTGATTAATAAAAGTTTAGAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCCTAAAGACATTCAAAGTGTTCTTAGAGTAAGCTATGATAGTCTTGAAGGCAATGAAAAGGATATTTTTCTTGACATAGCATGCTTCTTCAATGGGAAGAAATGGGAATATGTAAAAAATGTATTAGATGGATGTGGTATGTTTACAGAAGATGGTATTAGAATACTAGTTGATAAATCTCTCGTAACTATCAAAGATGGTTACTTGAGGATGCATGATCTAATACAGAATATGGGTAGAGAGATTGTGAAGCAGGAGGCACCAAAAGAAGTTAGAGACCGCAGCAGATTATGGTTTCATGAAGATGTTCTTGAGCTACTACCCGATGATAAAAACTTTGAGCATTTGACTTACATGAATTTCTCCCATTGTGAATCCATCACTCATTTTCCTAATGTATCTGAAGCCCAATGTTTAAGAAAGTTGATACTCAATGGATGCATAAACTTGGTTAGGTTTGATGAATCAGTTGGATTTCTCCCAAACCTTACATATTTGAGAGCTTCAAAGTGCACTAAGTTAAGAAAGTTTCTTTCAAGAATTTGTCTGCCTTCACTAGAGCACCTTTCCTTTAACTGGTGTAGAATACTTGGACTCTTCCCGGACATTGTGGGAAAGATGGATAAGCCATTAAAGATTTGTTTGAAAGCTACTGCTATTCAAGAGCTTCCAGATTCTTTTGTTGATCTTGTAGGACTTCGCTATTTAGATTTGACAAGTTGCGAGAAACTTGGTTATCTTCCAAGCAGCTTATTTATGCTGCCAAATTTTGTCACATTGAAAGTTGGAGGATGCCCTCAACTTGGTCGATCATTTGCAAGATTCAGAGGAAGCCTTCCAACTACTGCAGAGAGCCGTCCAAGTTTAGAAACTCTGCATTTCAGCCATGCAAGTTTACGTGACGAAGATCTTCATGTAATTATGCAGAGTTTTCCAAACTTGGAAGTCTTAGATGTTTCATCAAACAACTTTGTGTCTATTCCAGCATGCATTCATGAATCGTCCTACTTGACAAGTTTGGATTTGAGTTACTGCCTAAATCTTCAAGAAATTCCAAAACTTCCCTCTAGTGTTAGGAAAGTGGATGTGAGACACTGCAATTCCTTAAGTGCAAGCACAACAAGTATGCTATGGTCACAGGTGTGCGAAGAGATATATAAATTACAAGTTGTGATGCCAACTTCCAATACACAGATTCCAGAATGGTGGGACCATTGTACAAGATGGAAGCACAATCCATCGTACCTGAATTTAAAGGCACGTGGCAAGTTCCCTGCTGTGGCTTTGGCGTTTGTGTTTGGAGAAATGAACTATCAATCTGTTGGGCTGCACTTGTCCATTGACTATGGGGATGTAAACTCTGCATACCAACCATCGCATAATTTCAGAGTTGCAGAAAATCATGTGTTGTTGTGCGACCTACGACTATGGTTCAGTGATGAGGAGTGGAAGAGACTTGATGCACATGTTGAGCATGGTAACAAATGGAAGACAGTGAAGGTGAGGTGTGTACCAGACATCATCCCAGTTCATTGGGGAGTGTATGTTTACAAGGAAGAAACAAGCATGGAAGATATCCAATTTCAGGAGAGGGAGTTGACTTACCAAAGTTGTCCGGATCGTTCATGGAAGAAGAGATTATCTTCTGCTGAGAAACTCGCCATTGCTAGCTTCTCAGAAAGCCTCCAAACTGTGGTAAAAAATTTGAAGCGGCTTATGGCTCCAAGAGAAGAAGAGCAATGCTTTTGCTTAATGCAACATGACAGAGATAAGGACAAAGATGAGGATGAGGATGAGGAAGAGGAAGGAGAGTCAGACATAGAAGCATAG 3132 0.4013 MANRASTSVIMATNYDVFLSFRGEETRHGFTGHLYDALCRNGINTFIDDENLRTGETIRPQLLQSIEASKISIIVFSTNYAASTWCLDELVQILRCHRERYQLVFPVFYKVEPSDVRHQRNTYKEAVDAHEIRFGCHSQKVKEWKEALAETSNMKGFHLKQGYEFKFIQEIVCKALTHIPPRQLLIEDRMIGLQTRVVEVESHLYSSYSTSKYRILSNIKSSKPKLYNNNTMLGIVGIGGSGKTTLAKALYNSICDRFECACFLFNVRKISDQEEGLVRLQQTLLSKLLGEWEIKVRSVEEGISMIKEKLGKKRALIVLDDVDKIEQLKALAGECDWFSYGTRIVITRDKYLLTAHKVEKIYKMKLLSDPESLELFCWNAFKMTRPKANYEDLSNQAIHYAQGLPLALKVIGSNLINKSLEEWKSALDKYEKNPPKDIQSVLRVSYDSLEGNEKDIFLDIACFFNGKKWEYVKNVLDGCGMFTEDGIRILVDKSLVTIKDGYLRMHDLIQNMGREIVKQEAPKEVRDRSRLWFHEDVLELLPDDKNFEHLTYMNFSHCESITHFPNVSEAQCLRKLILNGCINLVRFDESVGFLPNLTYLRASKCTKLRKFLSRICLPSLEHLSFNWCRILGLFPDIVGKMDKPLKICLKATAIQELPDSFVDLVGLRYLDLTSCEKLGYLPSSLFMLPNFVTLKVGGCPQLGRSFARFRGSLPTTAESRPSLETLHFSHASLRDEDLHVIMQSFPNLEVLDVSSNNFVSIPACIHESSYLTSLDLSYCLNLQEIPKLPSSVRKVDVRHCNSLSASTTSMLWSQVCEEIYKLQVVMPTSNTQIPEWWDHCTRWKHNPSYLNLKARGKFPAVALAFVFGEMNYQSVGLHLSIDYGDVNSAYQPSHNFRVAENHVLLCDLRLWFSDEEWKRLDAHVEHGNKWKTVKVRCVPDIIPVHWGVYVYKEETSMEDIQFQERELTYQSCPDRSWKKRLSSAEKLAIASFSESLQTVVKNLKRLMAPREEEQCFCLMQHDRDKDKDEDEDEEEEGESDIEA* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0657 1043 ProSiteProfiles Leucine-rich repeat profile. 747 768 IPR001611 GO:0005515
Ahy3g0657 1043 SMART till_3 14 154 IPR000157 GO:0007165
Ahy3g0657 1043 Gene3D - 11 184 IPR035897 -
Ahy3g0657 1043 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
Ahy3g0657 1043 Gene3D Ribonuclease Inhibitor 639 842 IPR032675 -
Ahy3g0657 1043 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 546 - -
Ahy3g0657 1043 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 554 865 - -
Ahy3g0657 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 460 IPR027417 -
Ahy3g0657 1043 Gene3D Ribonuclease Inhibitor 537 638 IPR032675 -
Ahy3g0657 1043 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 546 IPR044974 GO:0006952
Ahy3g0657 1043 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 554 865 IPR044974 GO:0006952
Ahy3g0657 1043 MobiDBLite consensus disorder prediction 1019 1043 - -
Ahy3g0657 1043 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Ahy3g0657 1043 Coils Coil 413 433 - -
Ahy3g0657 1043 Gene3D - 366 450 IPR042197 -
Ahy3g0657 1043 PRINTS Disease resistance protein signature 232 247 - -
Ahy3g0657 1043 PRINTS Disease resistance protein signature 309 323 - -
Ahy3g0657 1043 PRINTS Disease resistance protein signature 401 415 - -
Ahy3g0657 1043 PRINTS Disease resistance protein signature 662 678 - -
Ahy3g0657 1043 MobiDBLite consensus disorder prediction 1027 1043 - -
Ahy3g0657 1043 SUPERFAMILY L domain-like 504 804 - -
Ahy3g0657 1043 Pfam TIR domain 14 172 IPR000157 GO:0007165
Ahy3g0657 1043 Pfam NB-ARC domain 231 449 IPR002182 GO:0043531
Ahy3g0657 1043 Gene3D - 188 363 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0657 Ahy-Chr3 6992254 6997405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0657 12 775 WRKY Transcription Factor Family AT4G12020 26.910 3.15e-57 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0657 - - ahf:112771910 1467.21