Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0635 ATGGAAGGGCAAGAAGCATTGAAAGGTACTAGTAGTTTTTCTTCAAAGTGTTCAGACTGTGGGAACCAAGCAAAGAAAGATTGCTCATACACAAGGTGCAGAACTTGCTGCAAGAACAAAGGATTTCACTGCCCAACCCATGTTAGAAGCACTTGGATCCCTGTCGATAGAAGACGCCATAAATCATCCTCATCATCATCACTAGTACTCATGGATCATCATCACTCTTCTCTCACTACAAATCTACACTTCCTTCATCATCAACATATCCCTAAAAGGCACAAGCACACCCCATATTCATCATCAGAGGAGTTTCCAGCAAGTATGAGTTCGGTGGCAATATTCAGGTGCGTTAGGGTGCGTTCGATGGATGAAAGTGTTAATGAAATTGCGTACCAAACATCTGTCAACATTGGAGGACATGTTTTCAGTGGTCTTCTTTATGATCAAGGCCCTCATCAACCACCACCATCAACCTCCATAGACCCTCACCTACACAGTAATACTAATAATCTCAATCTTATGATGATGAGTAATAGTAGTAATAATAATGTTCCAACCATTATTGATGCTCCTCCTCTTCCTCACGATCAGCCTTTTCTATCTTCTTCTACTTCTTTTGTTAGGCCTCCTACTATGCCATATTATTTTTCACACCCTCCTAAACCTTGA 672 0.4107 MEGQEALKGTSSFSSKCSDCGNQAKKDCSYTRCRTCCKNKGFHCPTHVRSTWIPVDRRRHKSSSSSSLVLMDHHHSSLTTNLHFLHHQHIPKRHKHTPYSSSEEFPASMSSVAIFRCVRVRSMDESVNEIAYQTSVNIGGHVFSGLLYDQGPHQPPPSTSIDPHLHSNTNNLNLMMMSNSSNNNVPTIIDAPPLPHDQPFLSSSTSFVRPPTMPYYFSHPPKP* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0635 223 Pfam Domain of unknown function (DUF702) 15 153 - -
Ahy3g0635 223 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 105 152 IPR006511 -
Ahy3g0635 223 MobiDBLite consensus disorder prediction 1 25 - -
Ahy3g0635 223 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 16 58 IPR006510 -
Ahy3g0635 223 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 186 IPR007818 GO:0003700|GO:0006355
Ahy3g0635 223 PANTHER BNAC01G23660D PROTEIN 10 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0635 Ahy-Chr3 6729851 6731398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0635 16 192 C2H2 Transcription Factor Family AT2G21400 42.708 5.06e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy3g0635 DUF702 1.70E-50 No_clan