Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0604 ATGTCGCCGTCGAACGGAAACAGCAGCAAGATCCGGCGTATAGTACGGATCCGGCAGATGCTAATGCGGTGGAGGAAGAAGGCGGCGGGGAGAGCGGCGGCGGACGTGCCGGCGGGACACGTGGCGGTGTGTGTTGGACCTAGCATGAGGAGGTTCATCGTGCGCGCGACGCAGTTGAATCACCCGATCTTCCAGAAGCTTCTGCTTCAAGCGGAAGAAGAATACGGTTTCTGTAACCATGGACCTCTCGCTATTCCTTGCGACGAAGAGCTATTCGAGGAGCTTCTTCGTGTCATGACCCGACCCGAATCCGTTTTCTCTACTTCTCTCGAAGAGTTTCAGAGAAGGTGCCACGTGGACTTCCGAAGTCAGGGTGATGGTAGCGGTAAAAAAGGTGGTGGTCGTGGAGAATCGTGGCCGTTGCTTCATGACGAGTTGATTTACTGA 447 0.5526 MSPSNGNSSKIRRIVRIRQMLMRWRKKAAGRAAADVPAGHVAVCVGPSMRRFIVRATQLNHPIFQKLLLQAEEEYGFCNHGPLAIPCDEELFEELLRVMTRPESVFSTSLEEFQRRCHVDFRSQGDGSGKKGGGRGESWPLLHDELIY* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0604 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 129 IPR003676 GO:0009733
Ahy3g0604 148 Pfam Auxin responsive protein 18 98 IPR003676 GO:0009733
Ahy3g0604 148 PANTHER SMALL AUXIN-UP RNA-RELATED 6 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0604 Ahy-Chr3 6323032 6323869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0604 6 121 Calmodulin-binding Proteins AT4G34750 51.938 3.59e-40 130