Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0598 ATGGGTTTCCGTTTACCTGCTATTCGAAGGGCTTCCTTCTCTGCTAGCCAATCATCTTCAAAATCCTTGGAAGCTCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAGCAGAAGCGTTTTCTGATCCCTGTATCATATTTGAACCAACCATCATTCCAAGACTTGTTGAGTCAAGCCGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCTTGCAGTGAAGATGCTTTCCGACAAATCACTTCTCACTTGAATAGCCTATAA 279 0.4373 MGFRLPAIRRASFSASQSSSKSLEAPKGYLAVYVGEKQKRFLIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDAFRQITSHLNSL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0598 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Ahy3g0598 92 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Ahy3g0598 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0598 Ahy-Chr3 6263983 6266204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0598 14 83 Calmodulin-binding Proteins AT3G43120 48.571 1.25e-18 73.6