Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0570 ATGGGAAGGTCACCTTGCTGTGAGAAAGCACACACAAACAAAGGTGCATGGACGAAGGAAGAAGATGACAGGCTCATATCTTACATTAGAGCTCATGGTGAGGGTTGCTGGAGATCTCTTCCAAAAGCGGCGGGCCTTCTCCGCTGCGGCAAGAGCTGCCGCCTCCGTTGGATCAACTATCTCCGCCCTGACCTCAAAAGAGGCAACTTCACTGAAGAAGAAGATGAACTCATCATCAAACTCCACAGTCTCCTTGGTAACAAGTGGTCGCTTATAGCTGGAAGATTGCCAGGGAGAACAGACAATGAGATAAAGAATTATTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCATAGGCCTCTCAATGATTCTTCTGCTTCACATCATCATCACAACAACCAAGAACAACAACAACAACAACAACAACCCTCTTCTCTTGTTGCAGCAGCCACAACCACCACCATATCTTTTGCTTCTTCTGTTTCTGCTTCTGCTTCCGCTGTTAAACAAGAACAAGATACTATTACTACTACTACTGCTACTACCACTACCACTACTAGTGCTACTTGCAACGCAAACATGTTTGGAATTATGGAGAAGAAGAACAAGAAGGATTATTCAAAGGGATCATCAATGGAAAGGTGCCCTGACTTGAATCTTGAGTTGACAATTAGTCCTCCACGCCATCTTGATGAACCTGATCACCAGAAATACAGTGGAATAGAGAGAGCCCTTTGCTTTGTTTGCAGCTTGGGTTTGCAGAACAGCAAGGATTGCCGGTGTGGATTCGACACTAATGCTAATGCTAATGGTGGCACTAATAGTAATGGCACCACCACCACCACCACCACCACTGCTACTGGTGCTGGTTATGATTTCTTGGGCTTGAAAACAGGTAGTGTTTGGGATTACAGAAGCTTGGAAATGAAGTGA 957 0.4514 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSSASHHHHNNQEQQQQQQQPSSLVAAATTTTISFASSVSASASAVKQEQDTITTTTATTTTTTSATCNANMFGIMEKKNKKDYSKGSSMERCPDLNLELTISPPRHLDEPDHQKYSGIERALCFVCSLGLQNSKDCRCGFDTNANANGGTNSNGTTTTTTTTATGAGYDFLGLKTGSVWDYRSLEMK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0570 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy3g0570 318 CDD SANT 69 112 IPR001005 -
Ahy3g0570 318 CDD SANT 16 61 IPR001005 -
Ahy3g0570 318 Gene3D - 14 66 - -
Ahy3g0570 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy3g0570 318 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy3g0570 318 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 273 - -
Ahy3g0570 318 SMART sant 66 114 IPR001005 -
Ahy3g0570 318 SMART sant 13 63 IPR001005 -
Ahy3g0570 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy3g0570 318 Gene3D - 69 154 - -
Ahy3g0570 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy3g0570 318 MobiDBLite consensus disorder prediction 139 156 - -
Ahy3g0570 318 MobiDBLite consensus disorder prediction 122 156 - -
Ahy3g0570 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy3g0570 318 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 273 - -
Ahy3g0570 318 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0570 Ahy-Chr3 5961815 5963419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0570 1 318 MYB Transcription Factor Family AT4G38620 56.386 2.45e-113 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g0570 Myb_DNA-binding 2.80E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0570 K09422 - zju:107404478 351.673