Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0549 ATGGCTTCACTATATGAGGTGCTTGGGATTTCAATGGGAGCAAGCGGGCATGAGATAAAAGCTGCATACAGAAAGCTAGCAAGAACATGCCACCCTGATGTTGTGGCCATGAATCAGAAGGAAAGCTCGGCCAACATGTTCATGAAGATCCATTCAGCTTATTCAACACTTTCAGACCCAGATAAGAGAGCTAAGTATGATAGAGAAACTTATGGACACAAGGTCATGATGAGATCTTCATCAAACATGGCTACTTCAGCTTCTATGTCAGCAACATACCAATCATTTTCTCAACAAGGGAGGAAGTGGGAAACAGATCAATGTTGGTAG 330 0.4273 MASLYEVLGISMGASGHEIKAAYRKLARTCHPDVVAMNQKESSANMFMKIHSAYSTLSDPDKRAKYDRETYGHKVMMRSSSNMATSASMSATYQSFSQQGRKWETDQCW* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0549 109 PANTHER - 2 109 - -
Ahy3g0549 109 Pfam DnaJ domain 4 67 IPR001623 -
Ahy3g0549 109 SMART dnaj_3 2 62 IPR001623 -
Ahy3g0549 109 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Ahy3g0549 109 CDD DnaJ 5 59 IPR001623 -
Ahy3g0549 109 ProSiteProfiles dnaJ domain profile. 3 70 IPR001623 -
Ahy3g0549 109 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 109 - -
Ahy3g0549 109 SUPERFAMILY Chaperone J-domain 2 73 IPR036869 -
Ahy3g0549 109 PRINTS DnaJ domain signature 5 23 IPR001623 -
Ahy3g0549 109 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy3g0549 109 PRINTS DnaJ domain signature 23 38 IPR001623 -
Ahy3g0549 109 Gene3D DnaJ domain 2 107 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0549 Ahy-Chr3 5731566 5732200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0549 5 67 C2H2 Transcription Factor Family AT1G74250 44.776 1.18e-10 55.1