Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0538 ATGGCGGCTACCGTTTCTGCGTGGTCGAAGCCAGGTGCGTGGGCTTTGGATTCTGAGGAACATGAAGCTGAGCTCCTTCAACAGCAAACTAGCAACAATAACGAAACTGCCCTCACCGGAAAACCACTAGCCGACTTCCCATCTTTGGCCGCGGCGGCCGCCGCAAAACCCAAGAAGAAGAAAGGCCAGACCTTTTCCCTTGCTGAGTTCACTGCCGCCAAAACCGACTACCAAGATCCCATCGTGCTCCCCACCGGTCCGCGCCAGCGCACCGCCGAGGAGCTCGACCGCGACCGCAACCGTCTTGGCGGAGGCTTCAGGAACTACGGCGGTGACCGCGCCAACAGAAGCTCCGGTGGTGGTGATGATTCCTCCAATTCGAGGTGGGGTTCCTCTAGGGTTTCTGACGAGCCGAGGCGGAACGGTGGGTTTAGGGATTCGAATCGCGAATTGGCTCCTTCCCGCGCCGACGAGATTGATAATTGGGCCGCCGCGAAGAAATCAACGGTCGGTAACGGTTTCGAGAGGAGGGAAAGGGATAGAGATAGGGAAAGGAGCGGTTTTTTCGATTCCCAATCGCGTGCTGATGAATCCGATAGTTGGGTTACGAACAAGAGTTCTGTGCCGTCAGAGAGTCGGAGATTCGGTTCCAACGGCGGTTCTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGGTAGGGTTTGGGTCTAGCGGCGGCGCAGATTCTGATAATTGGAACAAGAAAAAGGTTGAATTTAACGGTGGAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTGTTCTGCAACCTCGTACATCGCCTGTGAACAATGAGAGCCAGGAGGGTGCTGGTAATGGTAATGGTAATGTGGTGAAACCAAAGGGTCCGAGCCCATTCGGCGAGGCGAGACCGAGGGAGGAGGTGCTGGCGGAGAAGGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGGCTGCTGAGAAAAAAGAGAGTTTTGGAAAGAGGGGTTTTGGTTCTGCCAATGGACGTGGTTCTAGTTTGTCTGAAGCCAGGGCTGAGCGGAGTTGGAGGAAGCCGGAATCCGAGACCGAGAGGAAGGCAGAATCTGAGACCGAGAGCAAGCCGGAATCTGATGATGGTCGTCCGAAAAGTGCTGATTCTGAGAAAATGGAGGATGAACATGTTGAAGAAAACTGA 1221 0.5446 MAATVSAWSKPGAWALDSEEHEAELLQQQTSNNNETALTGKPLADFPSLAAAAAAKPKKKKGQTFSLAEFTAAKTDYQDPIVLPTGPRQRTAEELDRDRNRLGGGFRNYGGDRANRSSGGGDDSSNSRWGSSRVSDEPRRNGGFRDSNRELAPSRADEIDNWAAAKKSTVGNGFERRERDRDRERSGFFDSQSRADESDSWVTNKSSVPSESRRFGSNGGSGGLGFERERKVGFGSSGGADSDNWNKKKVEFNGGSERSEGGGGRPRLVLQPRTSPVNNESQEGAGNGNGNVVKPKGPSPFGEARPREEVLAEKGQDWKKIDEQLESMKIKEAAEKKESFGKRGFGSANGRGSSLSEARAERSWRKPESETERKAESETESKPESDDGRPKSADSEKMEDEHVEEN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0538 406 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 377 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 25 39 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 133 162 - -
Ahy3g0538 406 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 377 IPR010433 GO:0003743
Ahy3g0538 406 MobiDBLite consensus disorder prediction 358 406 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 171 192 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 76 406 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 272 288 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 118 132 - -
Ahy3g0538 406 Pfam Plant specific eukaryotic initiation factor 4B 7 331 IPR010433 GO:0003743
Ahy3g0538 406 MobiDBLite consensus disorder prediction 301 342 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 193 217 - -
Ahy3g0538 406 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0538 Ahy-Chr3 5651991 5654154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0538 1 366 Eukaryotic Initiation Factors Gene Family AT4G38710 51.493 8.32e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0538 - - gmx:100820014 451.825