Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0490 ATGGCAAATCCAGCTTCAACTTCTGAGACCATGGCTACTAATTACGATGTCTTTCTGAGTTTTAGGGGTGAAGACACACGTCATGGATTCACAGGTCATCTCTACGATGCTCTCTGCCGCAACGGAATCAACACCTTCATCGATGATGAGAATCTCAGAACAGGAGAAACAATTCGACCTCAACTCCTTCAATCCATTGAAGCCTCAAAGATCTCCATTGTTGTTTTCTCAACAAACTATGCATCTTCAACATGGTGCCTTGATGAACTCGTCCAGATCCTTCGGTGTCACAGGGAAAGGAACCAGCTTCTGTTTCCAGTCTTCTACAAAATAAAGCCTTCCCATGTAAGGCATCAGAAGAAAACTTACAAGGAAGCCATGGATGCTCATGAAAAAAGGTTTGGTTGTCACTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGGAGGAAGCATCCAACAGGAAAGGCTTTCATTTGAAACAAGAGTATGAGTTCGAGTTTATTCAAAAAATTGTAAGCAAGGCATTGACTCATATACCTCCAAGACAATTACTTATTGGGGATCATATGGTTGGAATGCAAACTCGAGTTGAAGAAGTGGAGTCACATCTATATTCTTGGTACAGGGTATTATCCAATGGCGAATCACCCAAACCAAAGCTCTACAACAACAATACCATGTTGGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACGCTTGCCAAAGCCTTGTATAACTCCATCTGCGACCGGTTTGAATGTGCTTGTTTTCTTCTCAATGTTAGAAAAATTTCAGATCAAGAAGAGGGCCTAGTACGTCTACAGCAAACGCTCCTCTCAAAGTTGCTTGGGGAGTGGGAAATCAAGGTCCGCAGTGTTGAGGAAGGAATCAGTATGATAAGAAAGAAACTTAACAAAAAAAGAGCTCTTATTGTTCTTGATGATGTCGATAAGATAGAACAATTAAAAGCATTGGCAGGAGAATGTGATTGGTTTAGTTACGAGACTCAAATTGTTATAACAACAAGGGATAAATCTCTTTTAGAAGCTCATGAAGTCGAAAAGATTTACGAGACGAAATTGCTAAGTGACCTTGAATCTCTAGAGCTCTTCTGTTGGAACGCCTTCAAAATGACAAGGCCCAAAGCAAACTATGAAGACCTATCCAATCAAGCAATACATTATGCCCAGGGCCTCCCATTAGCCTTAAAGGTTATAGGCTCTAATTTGATTAATAAAAGTTTAGAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCCTAAAGACATTCAAAGTGTTCTTAGAGTAAGCTATGATAGTCTTGAAGGCAATGAAAAGGATATTTTTCTTGACATAGCATGCTTCTTCAATGGGAAGAAATGGGAATATGTAAAAAATGTATTAGATGGATGTGGTATGTTTACAGAAGTTGGTATTAGAATACTAGCTGATAAATCTCTCGTAACTATCAAAGATGGTTACTTGAGGATGCATGATCTAATACAGAATATGGGTAGAGAGATTGTGAAGCAGGAGGCACCAAGAGAAGTTAGTGACCGCAGCAGATTATGGTTTCATGAAGATGTTCTTGAACTACTACCCGATGATAAAGAAAATAAAAAAATTGAAGGAATAAAGCTTGTTCAATGTGAAGAAGATGATTGGACTGACACTGCCCTTGAAAAGATGAAGAAACTTAGAATTCTCATTCTTCGGAACACAAACCTTTCATGTCGAACTATTCTTCTACCTGAGCAATTAAGGCTGCTTGATTGGAAGGGGTATCCTTCAAAATCTATTCCGTCGAACTTAAAAAAAATTGTTGCCTTCAGTTTACGTCATAGTCCTCTCACGTTGGAAAACTCGTTTCAGAACTTTGAGCATTTGACTTACATGAATTTCTCCCATTGTGAATCCATCACTCATTTTCCTAGCGTATCTAAAACCCGAAGTTTAAGAAAATTGATACTCAATGGATGCAAAAACTTGGTTAGCTTTGATGAATCGGTTGGAGATCTCCCAAACCTTACATATTTGAGAGCTTCAAAGTGCCCTAAATTAAGAAAGTTTCTTTCAAGAATTTGTCTGCCTTCACTAGAACACCTTTCCTTTAACTGGTGTACAAGTCTTGGACTCTTCCCAGACATAGTGGGAAAGATGGATAAGCCATTAAAGATTTGTCTGAAAGCTACTGCTATTGAAGAGCTTCCAGATTCCTTTTTTGATCTTGTAGGACTTCGCTATTTAGATTTGACAAGTTGCGAGAAACTTGGTTTTCTTCCAAGCTCCTTATTTATGCTGCCAAATTTGGTCACATTGAAAGTTGGAGGATGCCCTCAACTTGGTGGAGCATTTGCAAGATTCAGAGGAAGCCTTTCAACTACTGCAGAGAGCGGTCCAAGTTTAGAAACTCTGCATTTCAGCCATGCAAGTTTATGTGACGAAGATCTTCATGTAATTATGCAGAGTTTTCCAAACTTGGAAGTCTTAAATGTTTCATCAAACAACTTTGTGTCTATTCCAGCATGCGTTCAAGAATCGTCCTACTTGACAAGTTTGGATTTGAGTTGTTGCCTAAAGCTTCAAGAAATTCCAGAACTTCCCTCTAGTGTTAGGAAAGTGGATGTGAGACACTGCAATTCCTTAAGTGCAAACACAACAAGTATGCTATGGTCACAGGTGCGCAGAGAGATAAATAAATTACAAGTTGTGATGCCAACTTCCAATACAAAGATTCCAGAATGGTGGGACGATCGTACAAGTTGGAAGTACTATTCACAGGACCTGAATTTCGAGGCACGTGGCAAGTTCCCAGTTGTGGCTTTGGCGTTTGTGTTTGGAGAAATGAACTATCAATCTGTTGGGCTGCACTTGTCCATTGAGTCTGGGGATGTAAACTCTGCATACCAACCATCGCATAATTTCACAGTTGCGGAAAATCATGTGTTGTTGTGCGACCTACGACTATGGTTCAGTGATGAGGAGTGGAAGAGACTTGATGCACATGTTGAGCATGGTAACACATGGAAGACAGTGAAGGTGAGGTGTGTACCAGGCATCATCCCATTTCATTGGGGAGTGTATGTTTACAAGAAAGAAACAAGCATGAAAGATATCCAATTTCAGAAAGAAGAGTGGGAAGATGTTCCATGTGGTGCAGGGAGATCCAATTGGAAGAAGAGTGCTGTGGAACTTGCCATTGCTTGCTTCTCAGAAAGCCTCAAAACTGTGGTAAAAAAATTGAAGCGGCTTATGGCTCCAAGAGAAGAAGAGCAAAGCTTTTGCTTAATGCAACAGGATGAGGATGAGGAAGAGGAAGGAGAGTCAGACATGGAAGCATAG 3354 0.4019 MANPASTSETMATNYDVFLSFRGEDTRHGFTGHLYDALCRNGINTFIDDENLRTGETIRPQLLQSIEASKISIVVFSTNYASSTWCLDELVQILRCHRERNQLLFPVFYKIKPSHVRHQKKTYKEAMDAHEKRFGCHSQKVKEWKEALEEASNRKGFHLKQEYEFEFIQKIVSKALTHIPPRQLLIGDHMVGMQTRVEEVESHLYSWYRVLSNGESPKPKLYNNNTMLGIVGIGGSGKTTLAKALYNSICDRFECACFLLNVRKISDQEEGLVRLQQTLLSKLLGEWEIKVRSVEEGISMIRKKLNKKRALIVLDDVDKIEQLKALAGECDWFSYETQIVITTRDKSLLEAHEVEKIYETKLLSDLESLELFCWNAFKMTRPKANYEDLSNQAIHYAQGLPLALKVIGSNLINKSLEEWKSALDKYEKNPPKDIQSVLRVSYDSLEGNEKDIFLDIACFFNGKKWEYVKNVLDGCGMFTEVGIRILADKSLVTIKDGYLRMHDLIQNMGREIVKQEAPREVSDRSRLWFHEDVLELLPDDKENKKIEGIKLVQCEEDDWTDTALEKMKKLRILILRNTNLSCRTILLPEQLRLLDWKGYPSKSIPSNLKKIVAFSLRHSPLTLENSFQNFEHLTYMNFSHCESITHFPSVSKTRSLRKLILNGCKNLVSFDESVGDLPNLTYLRASKCPKLRKFLSRICLPSLEHLSFNWCTSLGLFPDIVGKMDKPLKICLKATAIEELPDSFFDLVGLRYLDLTSCEKLGFLPSSLFMLPNLVTLKVGGCPQLGGAFARFRGSLSTTAESGPSLETLHFSHASLCDEDLHVIMQSFPNLEVLNVSSNNFVSIPACVQESSYLTSLDLSCCLKLQEIPELPSSVRKVDVRHCNSLSANTTSMLWSQVRREINKLQVVMPTSNTKIPEWWDDRTSWKYYSQDLNFEARGKFPVVALAFVFGEMNYQSVGLHLSIESGDVNSAYQPSHNFTVAENHVLLCDLRLWFSDEEWKRLDAHVEHGNTWKTVKVRCVPGIIPFHWGVYVYKKETSMKDIQFQKEEWEDVPCGAGRSNWKKSAVELAIACFSESLKTVVKKLKRLMAPREEEQSFCLMQQDEDEEEEGESDMEA* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0490 1117 SUPERFAMILY "Winged helix" DNA-binding domain 433 537 IPR036390 -
Ahy3g0490 1117 MobiDBLite consensus disorder prediction 1098 1117 - -
Ahy3g0490 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 456 IPR027417 -
Ahy3g0490 1117 MobiDBLite consensus disorder prediction 1100 1117 - -
Ahy3g0490 1117 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 907 - -
Ahy3g0490 1117 Pfam TIR domain 14 174 IPR000157 GO:0007165
Ahy3g0490 1117 PRINTS Disease resistance protein signature 745 761 - -
Ahy3g0490 1117 PRINTS Disease resistance protein signature 304 318 - -
Ahy3g0490 1117 PRINTS Disease resistance protein signature 227 242 - -
Ahy3g0490 1117 PRINTS Disease resistance protein signature 397 411 - -
Ahy3g0490 1117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 907 IPR044974 GO:0006952
Ahy3g0490 1117 CDD AAA 230 345 - -
Ahy3g0490 1117 Gene3D - 9 180 IPR035897 -
Ahy3g0490 1117 Coils Coil 409 429 - -
Ahy3g0490 1117 SMART till_3 14 154 IPR000157 GO:0007165
Ahy3g0490 1117 Gene3D Ribonuclease Inhibitor 731 909 IPR032675 -
Ahy3g0490 1117 Gene3D Ribonuclease Inhibitor 557 730 IPR032675 -
Ahy3g0490 1117 Pfam NB-ARC domain 226 445 IPR002182 GO:0043531
Ahy3g0490 1117 SMART AAA_5 224 363 IPR003593 -
Ahy3g0490 1117 Gene3D - 362 446 IPR042197 -
Ahy3g0490 1117 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Ahy3g0490 1117 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 156 IPR035897 -
Ahy3g0490 1117 Gene3D - 181 358 IPR027417 -
Ahy3g0490 1117 SUPERFAMILY L domain-like 549 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0490 Ahy-Chr3 5101123 5107772 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0490 12 785 WRKY Transcription Factor Family AT4G12020 29.463 4.91e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0490 - - ahf:112771910 1898.63