Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0488 ATGGCTACTATCTGCGATGTATTTCTGAGTTTCAGGGGTGAAGAGACACGTCATGGATTCACAGGTCATCTCTATGATGCTCTTTGCCGCAACGGAATCAGCACCTTCATCGATGATGAGAATCTCAGAACAGGAGAAACAATTCGACCTCAACTCCTTCAATGGATTGAAGCAGCAAAGATCTCGATTATTGTTTTCTCAACAAACTATGCAGCTTCAACATGGTGCCTTGATGAACTCGTCAAGATCCTGCAATGTCGCAGGGAAAGGAACCAACTTGTGTTTCCAGTCTTCTACAAAGTAGAGCCCTCAGATGTACGGCATCAGAGGAACACTTACAAGGAAGCCGTGGATGCTCATGAAATCAGGTTTGGTTGTCACTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGGCCGAAACATCCAACATGAAAGGATTTCATTTGAAACAAGGGTATGAGTTCGAGTTTATTCAAAAAATTGTAAGCAAGGCATTGACTGGTATACCTCCAAGACAATTACTTATTGGGGATCATATGGTTGGATTGCAAACTCGAGTTGTAGAAGTGGAGTCACATCTATATTCTAAGTACAGGACATTATCCAATGGCGAATCACCCAAAAGAAAGCACTACAATAACATTGCCATGTTGGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACGCTTGCCAAAGCCTTGTATAACTCCATCTGCGACCGGTTTGAATGTGCTTGTTTTCTTTTCAATGTTAGAAAAATTTCAGATCAAGAAGAGGGCCTAGTACGTCTACAGCAAACGCTCCTCTCAAAGTTGCTTGGGGAGGGGGAAATCAAGGTCCGCAGTGTTGAGGAAGGAATCAGTATGATCAAAGAGAAACTTAGCAAAAAAAGAGCTCTTATTGTTCTTGATGATGTTGATAAGATAGAAGAATTAAAAGCATTGGCAGGAGAATGTGATTGGTTTAGTGACAAGACTCGAATTATTATAACAACAAGGGATAAATATCTTCTAACAGCTCATGAAGTCGAAAAGATTTACGAGATGAAATTGCTAAGTGACCCTGAATCTCTAGAGCTCTTCTGTTGGAACGCCTTCAAAATGACAGGGCCCAAAGCAAACTATGAAGATCTATCCAATCAAGCAATATATTATGCTCAGGGCCTTCCATTAGCCTTAAAGGTTATAGGGTCTAATTTGATTAATAAAAATTTAGAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCCTAAAGACATTTGA 1275 0.4063 MATICDVFLSFRGEETRHGFTGHLYDALCRNGISTFIDDENLRTGETIRPQLLQWIEAAKISIIVFSTNYAASTWCLDELVKILQCRRERNQLVFPVFYKVEPSDVRHQRNTYKEAVDAHEIRFGCHSQKVKEWKEALAETSNMKGFHLKQGYEFEFIQKIVSKALTGIPPRQLLIGDHMVGLQTRVVEVESHLYSKYRTLSNGESPKRKHYNNIAMLGIVGIGGSGKTTLAKALYNSICDRFECACFLFNVRKISDQEEGLVRLQQTLLSKLLGEGEIKVRSVEEGISMIKEKLSKKRALIVLDDVDKIEELKALAGECDWFSDKTRIIITTRDKYLLTAHEVEKIYEMKLLSDPESLELFCWNAFKMTGPKANYEDLSNQAIYYAQGLPLALKVIGSNLINKNLEEWKSALDKYEKNPPKDI* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0488 424 Gene3D - 2 171 IPR035897 -
Ahy3g0488 424 Gene3D - 172 349 IPR027417 -
Ahy3g0488 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 424 IPR027417 -
Ahy3g0488 424 Coils Coil 399 419 - -
Ahy3g0488 424 SMART AAA_5 214 354 IPR003593 -
Ahy3g0488 424 SMART till_3 4 144 IPR000157 GO:0007165
Ahy3g0488 424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 424 IPR044974 GO:0006952
Ahy3g0488 424 Pfam NB-ARC domain 216 418 IPR002182 GO:0043531
Ahy3g0488 424 Gene3D - 352 424 IPR042197 -
Ahy3g0488 424 PRINTS Disease resistance protein signature 294 308 - -
Ahy3g0488 424 PRINTS Disease resistance protein signature 217 232 - -
Ahy3g0488 424 PRINTS Disease resistance protein signature 387 401 - -
Ahy3g0488 424 Pfam TIR domain 6 164 IPR000157 GO:0007165
Ahy3g0488 424 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 9 424 - -
Ahy3g0488 424 CDD AAA 208 335 - -
Ahy3g0488 424 ProSiteProfiles TIR domain profile. 3 169 IPR000157 GO:0007165
Ahy3g0488 424 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 147 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0488 Ahy-Chr3 5074187 5076541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0488 6 399 WRKY Transcription Factor Family AT4G12020 25.693 7.77e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0488 - - ahf:112789002 854.358