Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0468 ATGGCTTCAACCACTCTTAGCAAACAAAAGAAGCCTTCTTCTGAGTCCTCATCAAGATGGACAGCAAAAGAAAATAAGCTCTTTGAGAAGGCACTTGCAGAATATGATAAAGATACTGCAGATAGGTGGCAGAATGTGGCAAAAGCAGTTGGTGGAAAATCTGTTGATGAAGTTAAGAGACATTATGAAATTCTCTTAGAAGATCTCAGACACATTGAGTCCGGCCATGTTCCAATTCCTAACTACAAGTCCACACCTTCAACCACCACCAATCTTGATGAAGAACAGAGTTTTTGCAGGCTTTTGAAGTATCTTAAACTGAGTTGA 327 0.3976 MASTTLSKQKKPSSESSSRWTAKENKLFEKALAEYDKDTADRWQNVAKAVGGKSVDEVKRHYEILLEDLRHIESGHVPIPNYKSTPSTTTNLDEEQSFCRLLKYLKLS* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0468 108 CDD SANT 19 66 IPR001005 -
Ahy3g0468 108 Gene3D - 11 79 - -
Ahy3g0468 108 PANTHER PROTEIN RADIALIS-LIKE 3 1 85 - -
Ahy3g0468 108 MobiDBLite consensus disorder prediction 1 21 - -
Ahy3g0468 108 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Ahy3g0468 108 ProSiteProfiles SANT domain profile. 15 70 IPR017884 -
Ahy3g0468 108 SMART sant 16 68 IPR001005 -
Ahy3g0468 108 Pfam Myb-like DNA-binding domain 18 62 IPR001005 -
Ahy3g0468 108 ProSiteProfiles Myb-like domain profile. 12 66 IPR001005 -
Ahy3g0468 108 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0468 Ahy-Chr3 4897967 4900573 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy3g0468 Myb_DNA-binding 1.20E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0468 - - ahf:112788989 212.231