Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0462 ATGCTATTTTTATGTCAAAAATGCAGCCTTTACCTTCTTCCATGCTCCTTTGTACCATTCAAATCAAAGTCCATCTGCAACCAAACTTCAACTTCCACCATTCTCAACTGCCATAACCCACATTCCCAAGATGCCCCAGATGAACATCATCAGAGCCCCGTTCACCGCAAACACAATTCCAAATCCACAAACTTTCTCCTTCAGAACCTTTCCCAGAACAACCAGAATCAGCAGCAACTCACTGCTCCCCAAAAGATTGAACTTGAAGAACACCCCATCATGCCCCACCAAGAAAAGGTGAAACTTTTGGAACTTTCCCTTGTTAGGAAGAGGACCCCTCAGTTCCCTGGTTCCATCTATGTTCAGTCCCCAAGTGACTCTGATGTGGGTTCTTCTCTTCCACCTATAAGAAACCTTTTTCAATCAAGTGTTGACAATGATGGTGGTGGCCATGTTGATGAAGAAGAGGAGGAGATGATAATGCGTGCAGTTGAGATTCGTAGGAAGGTGACTTTGGAGATTTTCAAAGAAGCCATGATGAAGGAGGGTAGGTTTGGAATCACTTACACTACTAACTTGGCTAATAGGCTGCAAGGTTTCCTTGACTATGTTATGATTGAAGCTGCTAGCTTGAAGAGGATGCCAGAATATTCTAACTCTAGTTTCAATTTGCGCGCCAAAACCGTCATTGAGGACTCCCAGGTTGTGCCACTTATCAGATGGTTGAAGCATAATGAACTATCATATCCTCAGATATCAAAGCTCATTTTGTTGTCAAGAGGAAGAATTGATTTGATAAGGGACCGTGTCCAGTGGTTGAAGTCGATTCATGTGAAAGGGGAGTTCCTTGGGGTTGCGCTTGTTAAGGGTGGTGAGAATATTTTGCACCGCAGCTATAAGGAACTTGATGAGATTGTTGAGTATCTGGTGTCCAATGGAGTTAGGAGAGACTGGGTGGGTTATGTCATTAGTCGATGTCCTCAATTGTTGTCGTACAGCTTAGAAGAAGTGAAGACTTGTGTGGCGTTCTATGTCGATATGGGTATGAATGAGAAGGATTTTGGCACAATGGTTTTTGATTTCCCCAGAGCACTTGGTCACTTAACTATGGAAGAAATGAACCAAAAGGTTAATTACTTGAAAGAATTTGGGCTTAAAAATGAGGATGTTGGCAAGTTGCTAGCATTTAGGCCACAATTGATGGGTTGTAGCATTGAAGAACAGTGGAAACCTCTTGTTAAGTATTTCTACTATTATGGAATCACTAAAGATGGCATGAGGAGAATGCTTACCCTTAAACCAATGGTCTTTTGTACCGATTTGAAGTTGAATATTGTTCCAAAGGTAAAATTTTTTCAGGACATAGGGGTTAGAGATGATGCAATTGGCAACATGCTTGTGAAGTTTCCTACTCTACTCACTTACAGCCTCAACAAGAAGATTAGGCCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTAACTGAGAAAGATATTGCCAAGGTTGTAGCTCTGGGACCTGAGCTCTTGGGATGCAGCATTGTACAAAAGCTTGAAGTAAATGTTAAATATTTTTTGTCTCTTGGCATACATGTCCGGCAGCTAGGTGAGATGGTTGCCGATTTCCCATTGCTGCTCAGATACAATCCCGATGTCCTTCGGCCTAAGTATGTTTATCTGCGGCGAACCATGATCCGACCTTTGCAAGATATCATCGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAAGGGCGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGCTTAATATTAAGCTGAGATACATGCTGGCTAGCAGTGATGTACAATTCAAGAAACTGGTCAATGATCTCATCAGAAAGCGCAACAAGTTTCAGTCTGGTGTTGCTGGCGAAGAGGAGGAAGAGACTCAATCCGAGGCTGTTATTCCAGGGGATACTGCTACTAAACTCCAATCATAA 1968 0.4233 MLFLCQKCSLYLLPCSFVPFKSKSICNQTSTSTILNCHNPHSQDAPDEHHQSPVHRKHNSKSTNFLLQNLSQNNQNQQQLTAPQKIELEEHPIMPHQEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPIRNLFQSSVDNDGGGHVDEEEEEMIMRAVEIRRKVTLEIFKEAMMKEGRFGITYTTNLANRLQGFLDYVMIEAASLKRMPEYSNSSFNLRAKTVIEDSQVVPLIRWLKHNELSYPQISKLILLSRGRIDLIRDRVQWLKSIHVKGEFLGVALVKGGENILHRSYKELDEIVEYLVSNGVRRDWVGYVISRCPQLLSYSLEEVKTCVAFYVDMGMNEKDFGTMVFDFPRALGHLTMEEMNQKVNYLKEFGLKNEDVGKLLAFRPQLMGCSIEEQWKPLVKYFYYYGITKDGMRRMLTLKPMVFCTDLKLNIVPKVKFFQDIGVRDDAIGNMLVKFPTLLTYSLNKKIRPVVIFLMTKAGVTEKDIAKVVALGPELLGCSIVQKLEVNVKYFLSLGIHVRQLGEMVADFPLLLRYNPDVLRPKYVYLRRTMIRPLQDIIEFPRFFSYSLEGRIIPRHKVLVENQLNIKLRYMLASSDVQFKKLVNDLIRKRNKFQSGVAGEEEEETQSEAVIPGDTATKLQS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0462 655 SMART mt_12 355 386 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 285 315 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 391 422 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 536 566 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 568 599 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 463 495 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 500 531 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 PANTHER CGI-12 PROTEIN-RELATED 77 637 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 MobiDBLite consensus disorder prediction 629 655 - -
Ahy3g0462 655 MobiDBLite consensus disorder prediction 38 60 - -
Ahy3g0462 655 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 77 637 - -
Ahy3g0462 655 Pfam mTERF 347 614 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 Pfam mTERF 266 346 IPR003690 GO:0003690|GO:0006355
Ahy3g0462 655 Gene3D Transcription termination factor 3, mitochondrial 396 627 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0462 Ahy-Chr3 4811996 4815149 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy3g0462 mTERF 5.90E-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0462 K15032 - zju:107426883 818.535