Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0440 ATGGAAGATCAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCATGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGATGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGTGGAACAGGACAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTACTGAAACCTCCTTGGGTTTCGATGAGAAGGCTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATGAATAACATAAATGGATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTGATGAGAGAATGCTGAGGGCTATGGACTTGTTTAAGGAATCAGTTGGTGATGGAATATTGACACAAGTTTGGGCACCAATGAAGCATGGTAATGACTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCACATGCTAGCTGGATACCGAGACGTGTCGAGGCAATTTACCTTTTCTGCTGAAGATAAACCAGGGTCTTTTCCAGGGCTTCCCGGACGTGTGTTTATCTCCCAAATTCCTGAATGGACCTCCAATGTTGGGTACTACAATAAAAGTGAGTACCTGAGGGTGGAGCATGCAATTAATCACGAGGTTCGTGGATCAATTGCGGTTCCCATAATTGATACGCTTGCTGAACCACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGACTGATTTTGACAAAGAACTAGAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTACGCCTCCACGACTTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTTACGAGCTGTGTGTAATGCGCATCGTTTGCCACTGGCATTGACATGGATCCCCTGTTATTACAGTGAGGGAGTAGGAGATGAAGCTTCAAGGATACGGATTAAAGATGGGCGTAAAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCTCTTCAATCAAATCGTTCATCCTTCTATTCCGATGTGAAGGCCTATAATATTAGTGAATATCCCCTTGTTCACCATGCGCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCAATATGAATGGAAGTGAAGAACAGCAACTTTTATTAGACAATCTATCAGATACTGTGCAGAGAATGTGTCAGAGTTTGAGGATAGTTTCGGATGCTGAATTACACGGGGTAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCTCATATGGCGCCGGATGGAGACCATGATTTGGTCCAGCCTATGTCCATGACGAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGACTGAGAAAAAGAAAAGTTCAGTGGAGAAGAATTTTAGCTTGAGTGTTCTCCAGCAATATTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACAACCCTGAAAAGGATATGCAGGCAACACGGAATTTCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCGTTCGTTAAAGAAAATACAAACCGTGCTTGACTCAGTCAAGGGTGTGGAAGGAGGACTGGAGTTTGATCCTTACAAGGGGGGATTTATGCCAGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCGGGAAGAAATGTTCTGGTAGCAAAGATTCAAAACCAATAGCCATGGATGATGGTGGATTACGGCAGGAACCCTTTCCGGTTTCTATTTTGGAAAGTTCTTGGTGTGATATAGCATATCACAGTCCAAACACCCTGGTTGCCGATGAGATGGCTGACAAGCTCGGCGAGCATCACAATCCCACTACTTCAAGCATGTCAGACTCGTCGAATGGCTCTGGCTCAATTTTGCGTGGCTCTCGGAAATTTGAGAAGCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAGTGGATCAAAAATTAATGTCAAAGCTGTCTACAAAGAAGATATGATCCGTTTCAAGTTTGACCCTGCAGCTGGTTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCTTTCCAGCTGAAGTATCTCGACGATGACGAGGAATGGGTGATGATCGTAACTGACTCAGATTTGCAAGAATGCATAGAAATATTGGATGATCTTGGCACCCGTGCTGTGAAATTTCTTGTTAGCGAGACATGCCTAGTGGTTTGA 2499 0.4254 MEDQFFSEGEGIGYWTPPGAQFDGPSMIDNGIKNLVSEEMLDNLPDLMNFDNLAGWVEQDNDPYFMTKDCGNYNATETSLGFDEKAVLQQLETQLGLSEDANDMNNINGSLQELSAADMGNCLVPRPFAWSLDERMLRAMDLFKESVGDGILTQVWAPMKHGNDFILSTSEQPYLLDHMLAGYRDVSRQFTFSAEDKPGSFPGLPGRVFISQIPEWTSNVGYYNKSEYLRVEHAINHEVRGSIAVPIIDTLAEPPCCAVLELVTTKEKTDFDKELEIVSSALQLVNLRTTTPPRLMSQCLSNNKRAALTEIIDVLRAVCNAHRLPLALTWIPCYYSEGVGDEASRIRIKDGRKIPGEKTVLCIEESACYINDIVVGGFVHACVEHYLEEGQGVAGKALQSNRSSFYSDVKAYNISEYPLVHHARKYKLNAAVAVRLRSIHTNDDDYIIEFFLPVNMNGSEEQQLLLDNLSDTVQRMCQSLRIVSDAELHGVEGSQVQFSKEEGSHMAPDGDHDLVQPMSMTNNETEAAHNQAMDGSRKQTEKKKSSVEKNFSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVKGVEGGLEFDPYKGGFMPGGSSNQEINAHKSSLFGKKCSGSKDSKPIAMDDGGLRQEPFPVSILESSWCDIAYHSPNTLVADEMADKLGEHHNPTTSSMSDSSNGSGSILRGSRKFEKRKHLKAKSPCVDSGSKINVKAVYKEDMIRFKFDPAAGCLQLYEEVATRFKLQIGSFQLKYLDDDEEWVMIVTDSDLQECIEILDDLGTRAVKFLVSETCLVV* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0440 832 SUPERFAMILY CAD & PB1 domains 740 827 - -
Ahy3g0440 832 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 57 680 - -
Ahy3g0440 832 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 57 - -
Ahy3g0440 832 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 654 829 - -
Ahy3g0440 832 ProSiteProfiles PB1 domain profile. 746 828 IPR000270 GO:0005515
Ahy3g0440 832 PANTHER PROTEIN NLP8 57 680 IPR045012 GO:0003700
Ahy3g0440 832 PANTHER PROTEIN NLP8 654 829 IPR045012 GO:0003700
Ahy3g0440 832 PANTHER PROTEIN NLP8 5 57 IPR045012 GO:0003700
Ahy3g0440 832 MobiDBLite consensus disorder prediction 701 722 - -
Ahy3g0440 832 ProSiteProfiles RWP-RK domain profile. 530 618 IPR003035 -
Ahy3g0440 832 Pfam RWP-RK domain 551 598 IPR003035 -
Ahy3g0440 832 Gene3D - 742 826 - -
Ahy3g0440 832 MobiDBLite consensus disorder prediction 703 722 - -
Ahy3g0440 832 MobiDBLite consensus disorder prediction 525 547 - -
Ahy3g0440 832 SMART PB1_new 746 828 IPR000270 GO:0005515
Ahy3g0440 832 Pfam PB1 domain 748 827 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0440 Ahy-Chr3 4571744 4576214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0440 1 825 NLP Transcription Factor Family AT2G43500 46.868 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy3g0440 PB1 1.90E-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0440 - - ahf:112736799 1515.36