Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0423 ATGGAAGATTACGCTGCCAGCAGCGATGACGAATACCGTTACTCCGATCCGGAGGACTCCGTCGACGCCTTCGATAACGATGATAACGATTATCAATTAGTCTCTTCCAAGGGTCCCTCTACTCAGGTGATTACGAAGGAGTCATTGCTAGCTGCACAGAAGGAGGATTTACGCAGGGTGATGGACATGCTATCGGTGAGGGAGCAACATGCACGTACCCTGCTTATTTTTCATCGTTGGGATGTGGAGAAGTTGTTTGCCGTGTATGTAGATAGGGGAAAACATTTTCTGTTTTCTGAAGCTGGTGTTACAGTGGATGAACATCGCGACTCTAATTCGTCAGCTGCTCCTTCGACAATAATGTGCGAAATTTGCATAGAGGATGTTCCTAGTGATGAAACAACAAAAATGGACTGCGGTCACTGTTTTTGCAACGGCTGTTGGACAGAGCATTTTATTGTCAAGATAAATGAGGGTCAAAGCAAGCGAATCAGATGCATGGCACACAAATGTTATTCCATTTGTGATGAAGCTGTTGTCAGAACTCTTCTCAGCAAAAAGCACCCTGATATGGCAGAGAAATATGAACGCTTTCTTCTTGAATCCTATATTGAAGACAACAAGAGAGTTAAATGGTGTCCTAGTACGCCTCATTGTGGGAATGCAATACGTGTTGAGGACGATGAATTATGTGAGGTAGAATGTTCATGTGGTTTACAGTTTTGCTTCAGTTGCTTGTCAGAAGCACATTCCCCATGCTCATGTTTGATGTGGGAGCTTTGGGCCAAAAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAACAGTTCATACCAAGCCTTGTCCAAAGTGCCACAAACCGGTCGAGAAAAATGGTGGTTGTAACTTGGTTAGCTGTATCTGTGGTCAAGCTTTTTGTTGGTTGTGTGGTGGAGCTACTGGTCGAGAGCATACCTGGTCAAGCATTGCTGGTCATAGCTGTGGTCGCTATAAAGAGCAAGAAAAAACAGCTGAACGGGCAAAGAGGGATCTGTATCGTTATATGCATTATCATAATCGTTACAAAGCTCACACAGATTCCTTTAAGCTTGAGAGTAAACTGAAGGAGACTATACAAGAGAAGATTGCTGTCTCAGAAGAAAAAGATTCTACGCTAAGGGATTATAGTTGGGTAAATAATGGGCTCTCTAGACTTTTCAGATCTAGGCGTGTCCTATCATATTCATATGCATTTGCGTTTTACATGTTTGGCGACGAGCTATTTAAGGAAGAAATGACAGAAGCTCAAAGGGAAATAAAACAGAACTTGTTTGAGGATCAGCAGCAGCAGCTTGAGGCAAACGTTGAAAAGCTCTCCAAAATTTTAGAGGAGCCTTTTGAAACTTTTGAAGATGATAAAGTCATGGAGATAAGGATGCAGATAATCAATCTGACCACTATCATTGACAAACTTTGTCAAAAAATGTATGAGTGTATTGAGAATGATTTACTAGGTTCTCTCCATATTGGTGTTCACAACATTGCTCCATACAAGTCAAAGGGGATCGAGAAGGCATCAGAACTTTCAGTTTGTTGGACAAATGAGGCCAATAATACCGGTGTAACAGCAGAACTCGATAGGCCTTCCGGATCAGGGAGCTCAGACGATAGTGGATGCTCTTCTCGCAAGCGCGCTAGGAAAGAGGGCCTCGGAGGCGCGTTTTTTGATCTAAACTTACCAGCAGAGTTTGTAGACAGAAATTGA 1746 0.4267 MEDYAASSDDEYRYSDPEDSVDAFDNDDNDYQLVSSKGPSTQVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEKLFAVYVDRGKHFLFSEAGVTVDEHRDSNSSAAPSTIMCEICIEDVPSDETTKMDCGHCFCNGCWTEHFIVKINEGQSKRIRCMAHKCYSICDEAVVRTLLSKKHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDELCEVECSCGLQFCFSCLSEAHSPCSCLMWELWAKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKEQEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQEKIAVSEEKDSTLRDYSWVNNGLSRLFRSRRVLSYSYAFAFYMFGDELFKEEMTEAQREIKQNLFEDQQQQLEANVEKLSKILEEPFETFEDDKVMEIRMQIINLTTIIDKLCQKMYECIENDLLGSLHIGVHNIAPYKSKGIEKASELSVCWTNEANNTGVTAELDRPSGSGSSDDSGCSSRKRARKEGLGGAFFDLNLPAEFVDRN* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0423 581 ProSiteProfiles Zinc finger RING-type profile. 122 170 IPR001841 -
Ahy3g0423 581 SMART ibrneu5 193 255 IPR002867 -
Ahy3g0423 581 SMART ibrneu5 263 328 IPR002867 -
Ahy3g0423 581 MobiDBLite consensus disorder prediction 535 552 - -
Ahy3g0423 581 Gene3D - 251 498 - -
Ahy3g0423 581 Pfam Ariadne domain 332 581 IPR045840 -
Ahy3g0423 581 SUPERFAMILY RING/U-box 193 261 - -
Ahy3g0423 581 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 516 IPR031127 GO:0004842|GO:0016567
Ahy3g0423 581 MobiDBLite consensus disorder prediction 535 558 - -
Ahy3g0423 581 SUPERFAMILY RING/U-box 263 320 - -
Ahy3g0423 581 MobiDBLite consensus disorder prediction 1 27 - -
Ahy3g0423 581 ProSiteProfiles TRIAD supradomain profile. 118 332 IPR044066 -
Ahy3g0423 581 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 516 - -
Ahy3g0423 581 SUPERFAMILY RING/U-box 118 205 - -
Ahy3g0423 581 Pfam IBR domain, a half RING-finger domain 193 255 IPR002867 -
Ahy3g0423 581 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 208 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0423 Ahy-Chr3 4359912 4363868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0423 61 556 ARIADNE family AT2G16090 70.341 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0423 K11968 - gmx:100783343 1059.28