Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0390 ATGACAATCTCCAAAATGTTGAAGTCGAAATTAAGGTTTCGGCCTCAAAGAAAGAATAATAATGCGAATGCCATTAACATTGGCATTAATGAAAACAAAGTTAACGACAAAGAAGAGATGAAGCCACTACCACCAACATGCAGTATATGCACCCTCCCTGTGTCCGTCGGTAAGGTCTTCAACAACAACAACGACCGTTGCATACACTCTTTCTATTACTGTCATAACTGCATCAGCCGCTACTTCGTCTACCGCGCCCGATTTTTCACCGCACAGAACATTTCTTGTCCTGACTTGAACTGCACCGTAAATCAAATCGACACTCTCTCCGATTTAGTCATCAATGAGTGTAAAAATAAGCCTGTGAGGAGAGTAGAGTGTCCTAATTGTAAGAAGGAGTTTCGCTTCAAGTGTCAGATTCTTTGGCATCATAATAAAAGCTGTTACGATTATGGTTTGCACAGTAACGATGTAAAGTTTGCGAAACTTGTTCGCAAGAAATAA 504 0.4048 MTISKMLKSKLRFRPQRKNNNANAINIGINENKVNDKEEMKPLPPTCSICTLPVSVGKVFNNNNDRCIHSFYYCHNCISRYFVYRARFFTAQNISCPDLNCTVNQIDTLSDLVINECKNKPVRRVECPNCKKEFRFKCQILWHHNKSCYDYGLHSNDVKFAKLVRKK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0390 167 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 43 108 IPR031127 GO:0004842|GO:0016567
Ahy3g0390 167 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 43 108 - -
Ahy3g0390 167 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 110 167 - -
Ahy3g0390 167 ProSiteProfiles Zinc finger RING-type profile. 47 97 IPR001841 -
Ahy3g0390 167 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 110 167 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0390 Ahy-Chr3 4103037 4103608 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy3g0390 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0390 K11975 - ahf:112769387 352.829