Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0383 ATGGAAGATCAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCATGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGATGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGGTAATATTCCATCTGTGACTGATCGTAATTTAGATAATGGAATTTCATCACTTGCCTCTATGCAGTATTCTCCACCTGATGCATTCAATTTAGTGGAACAGGACAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTACTGAAACCTCCTTGGGTTTCGATGAGAAGGCTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATGAATAACATAAATGGATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTGATGAGAGAATGCTGAGGGCTATGGACTTGTTTAAGGAATCAGTTGGTGATGGAATATTGACACAAGTTTGGGCACCAATGAAGCATGGTAATGACTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCACATGCTAGCTGGATACCGAGACGTGTCGAGGCAATTTACCTTTTCTGCTGAAGATAAACCAGGGTCTTTTCCAGGGCTTCCCGGACGTGTGTTTATCTCCCAAATTCCTGAATGGACCTCCAATGTTGGGTACTACAATAAAAGTGAGTACCTGAGGGTGGAGCATGCAATTAATCACGAGGTTCGTGGATCAATTGCGGTTCCCATAATTGATACGCTTGCTGAACCACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGACTGATTTTGACAAAGAACTAGAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTACGCCTCCACGACTTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTTACGAGCTGTGTGTAATGCGCATCGTTTGCCACTGGCATTGACATGGATCCCCTGTTATTACAGTGAGGGAGTAGGAGATGAAGCTTCAAGGATACGGATTAAAGATGGGCGTAAAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCTCTTCAATCAAATCGTTCATCCTTCTATTCCGATGTGAAGGCCTATAATATTAGTGAATATCCCCTTGTTCACCATGCGCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCAATATGAATGGAAGTGAAGAACAGCAACTTTTATTAGACAATCTATCAGATACTGTGCAGAGAATGTGTCAGAGTTTGAGGATAGTTTCGGATGCTGAATTACACGGGGTAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCTCATATGGCGCCGGATGGAGACCATGATTTGGTCCAGCCTATGTCCATGACGAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGACTGAGAAAAAGAAAAGTTCAGTGGAGAAGAATTTTAGCTTGAGTGTTCTCCAGCAATATTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACAACCCTGAAAAGGATATGCAGGCAACACGGAATTTCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCGTTCGTTAAAGAAAATACAAACCGTGCTTGACTCAGTCAAGGGTGTGGAAGGAGGACTGGAGTTTGATCCTTACAAGGGGGGATTTATGCCAGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCGGGAAGAAATGTTCTGGTAGCAAAGATTCAAAACCAATAGCCATGGATGATGGTGGATTACGGCAGGAACCCTTTCCGGTTTCTATTTTGGAAAGTTCTTGGTGTGATATAGCATATCACAGTCCAAACACCCTGGTTGCCGATGAGATGGCTGACAAGCTCGGCGAGCATCACAATCCCACTACTTCAAGCATGTCAGACTCGTCGAATGGCTCTGGCTCAATTTTGCGTGGCTCTCGGAAATTTGAGAAGCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAGTGGATCAAAAATTAATGTCAAAGCTGTCTACAAAGAAGATATGATCCGTTTCAAGTTTGACCCTGCAGCTGGTTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCTTTCCAGCTGAAGTATCTCGACGATGACGAGGAATGGGTGATGATCGTAACTGACTCAGATTTGCAAGAATGCATAGAAATATTGGATGATCTTGGCACCCGTGCTGTGAAATTTCTTGTTAGGGAGACATGCCTAGTGGTTTGA 2592 0.4228 MEDQFFSEGEGIGYWTPPGAQFDGPSMIDNGIKNLVSEEMLDNLPDLMNFDNLAGWGNIPSVTDRNLDNGISSLASMQYSPPDAFNLVEQDNDPYFMTKDCGNYNATETSLGFDEKAVLQQLETQLGLSEDANDMNNINGSLQELSAADMGNCLVPRPFAWSLDERMLRAMDLFKESVGDGILTQVWAPMKHGNDFILSTSEQPYLLDHMLAGYRDVSRQFTFSAEDKPGSFPGLPGRVFISQIPEWTSNVGYYNKSEYLRVEHAINHEVRGSIAVPIIDTLAEPPCCAVLELVTTKEKTDFDKELEIVSSALQLVNLRTTTPPRLMSQCLSNNKRAALTEIIDVLRAVCNAHRLPLALTWIPCYYSEGVGDEASRIRIKDGRKIPGEKTVLCIEESACYINDIVVGGFVHACVEHYLEEGQGVAGKALQSNRSSFYSDVKAYNISEYPLVHHARKYKLNAAVAVRLRSIHTNDDDYIIEFFLPVNMNGSEEQQLLLDNLSDTVQRMCQSLRIVSDAELHGVEGSQVQFSKEEGSHMAPDGDHDLVQPMSMTNNETEAAHNQAMDGSRKQTEKKKSSVEKNFSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVKGVEGGLEFDPYKGGFMPGGSSNQEINAHKSSLFGKKCSGSKDSKPIAMDDGGLRQEPFPVSILESSWCDIAYHSPNTLVADEMADKLGEHHNPTTSSMSDSSNGSGSILRGSRKFEKRKHLKAKSPCVDSGSKINVKAVYKEDMIRFKFDPAAGCLQLYEEVATRFKLQIGSFQLKYLDDDEEWVMIVTDSDLQECIEILDDLGTRAVKFLVRETCLVV* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0383 863 MobiDBLite consensus disorder prediction 732 753 - -
Ahy3g0383 863 SMART PB1_new 777 859 IPR000270 GO:0005515
Ahy3g0383 863 Pfam PB1 domain 779 858 IPR000270 GO:0005515
Ahy3g0383 863 PANTHER PROTEIN NLP8 686 861 IPR045012 GO:0003700
Ahy3g0383 863 PANTHER PROTEIN NLP8 5 711 IPR045012 GO:0003700
Ahy3g0383 863 Gene3D - 773 857 - -
Ahy3g0383 863 ProSiteProfiles PB1 domain profile. 777 859 IPR000270 GO:0005515
Ahy3g0383 863 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 686 861 - -
Ahy3g0383 863 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 711 - -
Ahy3g0383 863 ProSiteProfiles RWP-RK domain profile. 561 649 IPR003035 -
Ahy3g0383 863 SUPERFAMILY CAD & PB1 domains 771 858 - -
Ahy3g0383 863 Pfam RWP-RK domain 582 629 IPR003035 -
Ahy3g0383 863 MobiDBLite consensus disorder prediction 734 753 - -
Ahy3g0383 863 MobiDBLite consensus disorder prediction 556 578 - -
Ahy3g0383 863 CDD PB1_NLP 780 858 IPR034891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0383 Ahy-Chr3 4002932 4019729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0383 1 858 NLP Transcription Factor Family AT2G43500 47.588 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy3g0383 PB1 1.50E-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0383 - - ahf:112736799 1585.08