Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0380 ATGACTAGCAGCTCTTTGAACTCAGATGATCCTTGTTTTGATGGTGATGGAAAATGGGCCACCAAGCTTCTTAGGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAGTTAGCTTCCCCTTATGGAGATTCTCAGCAGAAACTAGCCTCATATTTTCTTCAAGCTCTATTCTGCAAGGCCACTCAAACAGGCCAAAGATTCTACATGAATCTAAAATCAGCATCTGAAAAGAACCAATCTTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGGTGCAATCTTGGAAGCCTTTTTAGAAGCAGGAGGAGAGAAAAACAAAAAGAAAAAGCTTCACATAATTGACATAAGCAACAACACTAGCACACTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGAGTAGTGATCATGTTGAAACTCCTCAATTGAAGCTCACAATTGTGTTGGTGAAAGAGAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTGCCCTTTGAGATTAACATGATAAATGGTGTGGAACATTTATGGAAGGTAACAAAAGAAGAGTTAGGAATAGTAGTTGAAGAAGAAGAAGATGATGATGATGATGATGATGCTTTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGGAGGGAGAAAGGGGTAATGTGATTGGAATGTTGAAGTCTCTTAGTCCAAGAATTGTGACAATTGTTGAGGAAGAAAGTGGTGGTAGTGATGTTTCTTGCATCACAAGAAATGATGATGATGACTTTGTAAAATGCTTTGAAGAGTGTTTAAGGTTTTACAAGATTTACTTTGAGATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAAAAGTTAATGCTAGAGAGGGAGTGTTCAAGAAACATACTTGGTGATTTGGGTTGCAATAATAATAATAATGATAGTGATCATAATAAAAGGGAGAGAGGAGTAGAGTGGTCTATGAGGATTAGGGAGTATTTTACTCCAATAGGCTTGAGTGATGATGTTGTGGATGATGTTAGGGCATTGCTAAAGAGATATAATAGGTCAGGGTGGTCATTGATGTTGCCATCATCAAAAGTAGAAGGAATTTACTTGAAATGGAGGGATCAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1278 0.3834 MTSSSLNSDDPCFDGDGKWATKLLRECARAINDRDSSKIQHLLWMLNELASPYGDSQQKLASYFLQALFCKATQTGQRFYMNLKSASEKNQSFDSARKMILKFQEVSPWTTFGHVASNGAILEAFLEAGGEKNKKKKLHIIDISNNTSTLCTQWPTFLESLATKSSDHVETPQLKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWKVTKEELGIVVEEEEDDDDDDDAFIAVNCVGGLRRVEEGERGNVIGMLKSLSPRIVTIVEEESGGSDVSCITRNDDDDFVKCFEECLRFYKIYFEMLEESFPTISNEKLMLERECSRNILGDLGCNNNNNDSDHNKRERGVEWSMRIREYFTPIGLSDDVVDDVRALLKRYNRSGWSLMLPSSKVEGIYLKWRDQPVLWASAWKP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0380 425 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 424 IPR005202 -
Ahy3g0380 425 PANTHER PROTEIN SHORT-ROOT-LIKE 6 424 - -
Ahy3g0380 425 Pfam GRAS domain family 21 424 IPR005202 -
Ahy3g0380 425 ProSiteProfiles GRAS family profile. 11 424 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0380 Ahy-Chr3 3986047 3987324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0380 5 425 GRAS Transcription Factor Family AT4G37650 47.166 8.83e-124 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy3g0380 GRAS 2.00E-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0380 - - adu:107477059 789.26