Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0369 ATGCCTCGCATTCCCCCAATTCTATTCCTTTTTTACTTCGCTGTGTTCACTTTGCAGCTCTTAACACAAGCGGTGTTACCTTCGGTTTTCTACGTTAATCTAATTCTGATGGAGGTTGAGATTGATGGCTCTAATAATGGGGAGGCAATAGAAAATGCTGCCATGGCTGATGATTGTAGCACCGATGAAGGAAACAACGCAGATGAAGCAAACAATGCTGATGAAGGGAACAACGCTGACGAAGGAAACAATGGTGATGATGGAAATAACATTGATGGACGTGCTATTGTGTCAGTTCAAAGCCAAGGTCAAGATGTGACTCAAGTTTCTGCTGGAGGGGCCATAACCCTAGCTGTTCCCGCACTTCCGGTCCCAATTGTTTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAGGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGGTGAACGGGATAGAATTCGGGAATTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGCCACCTACAAAAGACATCTTGAATTGATACTCGAGCACATTGACGAGTATAACGAGAGCCTATCGAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACCCTTTAA 846 0.4338 MPRIPPILFLFYFAVFTLQLLTQAVLPSVFYVNLILMEVEIDGSNNGEAIENAAMADDCSTDEGNNADEANNADEGNNADEGNNGDDGNNIDGRAIVSVQSQGQDVTQVSAGGAITLAVPALPVPIVSPVEPYVGQEFESEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMGERDRIRELNQQLTAEKKRSATYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0369 281 Coils Coil 248 268 - -
Ahy3g0369 281 Pfam FAR1 DNA-binding domain 147 212 IPR004330 -
Ahy3g0369 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 212 271 - -
Ahy3g0369 281 MobiDBLite consensus disorder prediction 65 85 - -
Ahy3g0369 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 69 210 - -
Ahy3g0369 281 Coils Coil 209 229 - -
Ahy3g0369 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 69 210 - -
Ahy3g0369 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 212 271 - -
Ahy3g0369 281 MobiDBLite consensus disorder prediction 58 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0369 Ahy-Chr3 3875124 3877431 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g0369 FAR1 5.50E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0369 - - adu:107476765 469.159