Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0364 ATGGGACACAGCTCGAAGAAGAAGAAGCGCGGCGGCGGAGGCGGCGGTGGCGGCAGGAGCAAGGGAAGAGCCCCTTCCAAAGATCACACTTCTCAATCCGCCAACGATGATATTGAACTCTCCGAAGAGATCACTGCTCTATGTGCGATTTTCCAAGAAGATTGCAAGGTTCTTCCTGGCTCACCTCCTCAAATACTTATTAAGATCAGGCCTTACTCTAAGGACATGGGTTATGAGGACTTGGATGTTTCTGCTCTTCTTCACGTCAGATGCTTACCTGGGTATCCCTTCAAGTGTCCCAAGCTGCAGATTACTCCTGAGAATGGCTTATTAGAGAGTGACACTGATAAACTATTGTCACTCCTCCATGATCAGGCTACTTTAAATGCTAGGGAGGGCCGAGTAATGATCTTTAATTTGGTTGAGGCTGCTCAAGAATTTCTGTCTGGAATTGAGCCAATTGCTAAACCAACTGAATCTAAGCCTTTGCACTCAACTAAGGAAAGCAATGAAGAATTGTTTCTCAAGGATATGGCACCGTCAAACAAAAATATATCTTTTGTTTATGGTTTCATAGACCTTTTCAGTGGTTATGGAGAGTCTTGGAATTGGGAAATTGGAATGGATGAAACTGCCGGAAAAAGTTCTTCTCTTCCTCCCTCTAAGTTAGACACCTCAAAATATGATTCTGAGGCCCGCGAAAAGAAATCTGACAGTAAGGAAAAACCATTAATAAAGCAAGAGCTCCCTGCTAAATTAGATACAGTTGGAGAAGTTAGTGCAGACGGCAATAAGAATACATCCTTGACTAGTTCAAGTGGAAATCTGGTGGACGATCTTGTGGGGAATGACATTGAAGGTGAGAAAGAGGATTTTGTCTTTGCTGAGTATGCACCAGAAGATGACGAACAAATGTATGAAAGTGTGTCTTCAGAATCTTTTTCTTCTGCCACTTCTCAACATCAAACATCCCAAACAGTTGAAAAGGATCTTATAATGGTTCACCTGCTTCGTCTATGTGCTTCTAAAGGAACACTGGTTGACTCTTTGCCACAAGTAGCAGAAGAGCTATACAATTTTGGGATATTTTCTGATTGGGCTCGTGATATGGCATCTAAACCTCCCTCCCTTTTTAACAAAACATTTGATAATGTTTTTCAGAAACATGTGGCTTCAACCAGAATATCTCAGTTTTGGAAACCTTCTGATCTTGGTGGTTCAAATACGATTCCCCATAGTTCTCGATATCTGAATGATTTTGAGGAGCTACGGCCTCTTGGACATGGTGGTTTTGGCCATGTTGTGCTGTGCAAAAATAAGCTTGATGGAAGGCAGTATGCTGTAAAGAAGATTCGCCTTAAGGACAAAACCATGCCCGAAAGAATATTAAGAGAAGTAGCCACACTTTCTCGTTTGCAGCATCAACATGTCGTTAGGTATTATCAGGCATGGTTTGAAACCGGAATCGCAAACTCTGAAAACGATGCGGCTTGGAGTTCAAGGACTACACTGAGCTCTTCTTTCAGCTATACCTATAAAGCTGCAAGCTCCAATAATGCCCTTGGGCATGAAAATCAGCTTGAATCAACGTACCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCACCAGGTGTTTGAATCATATAATCATTTCGACAAAGAGCTGGCATGGCATTTGTTTCGTCAAATAGTGGAAGGTTTGGCACATATACATGGACAAGGAATAATTCATCGGGATTTGACACCAAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTGGACAAGCTTGATCATGATCTTAGCCTTCCAGTTGATCCACCTGGAGTTTCTACAGATGGCACTGGACAAGTGGGGACTTATTTCTATACGGCTCCTGAAATTGAACAAGGATGGCCTAAGATTGATGAGAAGGCGGATATGTACAGCCTAGGTGTTGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCCATGGAGAGACATATTGTGTTGTCTGATCTGAAACAGAAGGGAGAACTTCCTCCGGCATGGGTTGCTCAGTTTCCAGAACAGGAATCCATAGTACGAAAGTTGATGTCTCCAGGTCCTTCTGATCGGCCTTCAGCCACAGAGCTTCTACATAATGCCTTTCCCCCCAGAATGGAATATGAATTGTTGGATGATATCCTCCGAACAATGAAGAAATCAGAGGATACAAGCATATATGACAAAGTTGTAAATGCCATCTTTGACCAAGAGATGTTAACTTCAAAACATATTCATCAAGCTGGAAGCTTGGGGACAGTTGGAGATAGTTCTTCATCTATTCAGTACACAGATCTTGAAACTGAGGTTCGAGATTATGTTGTAGATGTGAGCAGGGAAATTTTCAGACAGCATTGTGCAAAGCATCTAGAAGTATTAACAATGCGATTGTTGGATGATTGTCCACAGTTTAACAGAAATGCAGTTAAACTTCTGACCCATGGAGGAGACATGCTCGAACTTTGCCATGAGCTGCGCTTGCCTTTTGTGAATTGGATCATATCAAATCAGAAATCTTCATTCAAAAGATATGAGATATCAAGTGTATACAGAAGAGCAGTTGGACATTCGTCACCAAATCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGTACCTCAGCATTGACAGAGGCAGAGGTCATAAAGGTGACAAGGGACATAGTCACTTGCTTTTTCCATGCAGATTCATGTGACATTCATCTAAACCATGGTGAGTTACTGGATGCAATTTGGTCGTGGGTTGGAGTCAAAGTAGAACACAGGCTTAAAGTTGCAGAGATTCTTTCCATGATGGGTTCTTTGCGTCCACAATCTTCAAAAAGGAAATCAAAATGGGGAGTGATAAGGCGGCAGCTTTTGCAGGAACTAAAATTAGCAGAAGCTACTGTAAACAGACTGCAGACAGTTGGTTTAAGGTTCTGTGATTCTGCAAATCAGGCACTTCCTAGATTAAGAGGAGCTCTTCGATCTGATAAACGCACATGCAAGGCACTTGATGAATTGTCTGAACTCTTCAGTCTCTTGAGAATTTGGAAGATTGACCAAAACGTCTATATTGATGCATTGATGCCACCAACTGAAAGTTATCATAGAGATTTATTTTTTCAGGTGTACTTAAGGAAGGAGAACAATCCTGGATCCCTCTCTGATGGTGCCTTGCTAGCTGTTGGTGGTCGTTATGACTATTTGCTTCATCAGTTATGCAGTCACAACTATAAAGGAAATCCCCCCAGTGGTGTAGGGAGTAGCCTTGCATTAGAGACAATAATTCAGAATTGTCCTGTGGATTTTAAGCCCCTTAGGCATTTTGTTTTTGCAAATCTTCTCGACTGTTTCAGAAATGAAGCCAGCACCAGTGTTCTTGTCTGTTCAAGAGGAGGAGGTGGTCTTTTGATGGAGCGGATGGAACTAGTTGCTGAATTATGGGAAGAGAATTTTAAGGCTGGATTTGTTCCCATCCCCGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAGCATGATATCAAATGTCTCGTCATCATAACGGATGCAGGTGTCTCACAGACAGGTTCTGTTAAGGTTCGACACCTTGAATATAAGAGGGAGAAAAATGTTGAGAGAGAAAATCTAGTCAAGTTTCTGTCAGATGCTATGGCAACACAATTCAGAAACCCTTCCATTTGGTTTTAA 3747 0.4182 MGHSSKKKKRGGGGGGGGRSKGRAPSKDHTSQSANDDIELSEEITALCAIFQEDCKVLPGSPPQILIKIRPYSKDMGYEDLDVSALLHVRCLPGYPFKCPKLQITPENGLLESDTDKLLSLLHDQATLNAREGRVMIFNLVEAAQEFLSGIEPIAKPTESKPLHSTKESNEELFLKDMAPSNKNISFVYGFIDLFSGYGESWNWEIGMDETAGKSSSLPPSKLDTSKYDSEAREKKSDSKEKPLIKQELPAKLDTVGEVSADGNKNTSLTSSSGNLVDDLVGNDIEGEKEDFVFAEYAPEDDEQMYESVSSESFSSATSQHQTSQTVEKDLIMVHLLRLCASKGTLVDSLPQVAEELYNFGIFSDWARDMASKPPSLFNKTFDNVFQKHVASTRISQFWKPSDLGGSNTIPHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKTMPERILREVATLSRLQHQHVVRYYQAWFETGIANSENDAAWSSRTTLSSSFSYTYKAASSNNALGHENQLESTYLYIQMEYCPRTLHQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLDKLDHDLSLPVDPPGVSTDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHIVLSDLKQKGELPPAWVAQFPEQESIVRKLMSPGPSDRPSATELLHNAFPPRMEYELLDDILRTMKKSEDTSIYDKVVNAIFDQEMLTSKHIHQAGSLGTVGDSSSSIQYTDLETEVRDYVVDVSREIFRQHCAKHLEVLTMRLLDDCPQFNRNAVKLLTHGGDMLELCHELRLPFVNWIISNQKSSFKRYEISSVYRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTRDIVTCFFHADSCDIHLNHGELLDAIWSWVGVKVEHRLKVAEILSMMGSLRPQSSKRKSKWGVIRRQLLQELKLAEATVNRLQTVGLRFCDSANQALPRLRGALRSDKRTCKALDELSELFSLLRIWKIDQNVYIDALMPPTESYHRDLFFQVYLRKENNPGSLSDGALLAVGGRYDYLLHQLCSHNYKGNPPSGVGSSLALETIIQNCPVDFKPLRHFVFANLLDCFRNEASTSVLVCSRGGGGLLMERMELVAELWEENFKAGFVPIPDPSLTEQYEYANEHDIKCLVIITDAGVSQTGSVKVRHLEYKREKNVERENLVKFLSDAMATQFRNPSIWF* 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0364 1248 PANTHER EIF-2-ALPHA KINASE GCN2 21 1247 - -
Ahy3g0364 1248 Gene3D Bira Bifunctional Protein; Domain 2 784 1119 IPR045864 -
Ahy3g0364 1248 Pfam Anticodon binding domain of tRNAs 1143 1240 IPR024435 -
Ahy3g0364 1248 ProSitePatterns Protein kinases ATP-binding region signature. 426 450 IPR017441 GO:0005524
Ahy3g0364 1248 Pfam RWD domain 40 148 IPR006575 GO:0005515
Ahy3g0364 1248 Coils Coil 973 993 - -
Ahy3g0364 1248 MobiDBLite consensus disorder prediction 211 273 - -
Ahy3g0364 1248 PANTHER HISTIDYL-TRNA SYNTHETASE 21 1247 - -
Ahy3g0364 1248 ProSitePatterns Tyrosine protein kinases specific active-site signature. 577 589 IPR008266 GO:0004672|GO:0006468
Ahy3g0364 1248 Gene3D Ubiquitin Conjugating Enzyme 29 157 IPR016135 -
Ahy3g0364 1248 Gene3D - 1139 1238 IPR036621 -
Ahy3g0364 1248 Gene3D Transferase(Phosphotransferase) domain 1 541 732 - -
Ahy3g0364 1248 Pfam Protein kinase domain 420 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0364 1248 Pfam Histidyl-tRNA synthetase 872 1113 IPR041715 -
Ahy3g0364 1248 SUPERFAMILY Protein kinase-like (PK-like) 416 737 IPR011009 -
Ahy3g0364 1248 SUPERFAMILY UBC-like 40 148 IPR016135 -
Ahy3g0364 1248 CDD STKc_EIF2AK4_GCN2_rpt2 413 722 - -
Ahy3g0364 1248 SUPERFAMILY Class II aaRS and biotin synthetases 785 1115 IPR045864 -
Ahy3g0364 1248 MobiDBLite consensus disorder prediction 1 36 - -
Ahy3g0364 1248 SUPERFAMILY Class II aaRS ABD-related 1143 1238 - -
Ahy3g0364 1248 Gene3D Phosphorylase Kinase; domain 1 408 538 - -
Ahy3g0364 1248 SMART RWD2001b 42 151 IPR006575 GO:0005515
Ahy3g0364 1248 ProSiteProfiles RWD domain profile. 42 151 IPR006575 GO:0005515
Ahy3g0364 1248 ProSiteProfiles Protein kinase domain profile. 420 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0364 1248 MobiDBLite consensus disorder prediction 226 248 - -
Ahy3g0364 1248 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0364 Ahy-Chr3 3832155 3843503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0364 420 725 MAP Kinase Kinase Kinase AT1G63700 25.078 1.51e-21 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Ahy3g0364 Pkinase 3.40E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0364 K16196 - gmx:100797996 1969.51