Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0345 ATGTCGTCAACCACCACCCCTCACGGTGGAGATTTCGACACGCCGACACTGGACATGGAGTCAGCGGAGCTCCTCCAAACCATATCGGAGCACGGCGGCTACGCCTACGTGAGAATGGCATCGCTGGCGGCGACCGGTGACGTCCGGGCCGCGGAGGCGGCGCTGGAGATGGCGTGGGAGCAGCTGCACTCAGGTCCGTGGCAGTCGGTGCTTCCGGTGTGGCGCGACGCGTACTCGATGGCATGCCTCCACGTGGCAAGGCACCACAACGGTAACGGCGAGTTCAAGGAGGCGCTTAGGGTTCTTGACATGGGGATCATCATGGGAGGGACGCTCCTCAGAAAGGATTTGGACTCTGCGATAGAGAAGGTTTCAGAGAGAGCCAACAGTTCCCGTAGGGTTTCTGAGGGAAGCTTCGAAGAAGGTTCGGTCAACAACTCCGAGCAACGAAGCCTTGTTCATCCGGAATTTCATGTGTCTCAGGTGCTCCAACTTTTACCTATCAAGTCCCTTTCTTCTAAGATTGTGGAAAAGAGATCTGGTTTGTCGCTGGACAAGTTCTTGAAAGATCATTACCTGGCTGGTACACCGGTTATCATCAGTGATTGTATGGTTCACTGGCCGGCCAAGACAAAATGGAACAACATAGACTATTTGCTGAGAGTTGCTGGTGATCGTACAGTTCCCGTCGAGGTTGGCAAGAACTATTTATGTACAGACTGGAAGCAAGAGCTAATCACATTTTCAGAGTTGCTTCAGCGTATAAAATCCAATGGTGGTTCTCCAGGGGGTCCTACATATCTTGCCCAGCATCCATTATTTGATCAAATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTGCCGGTGGAGGGGAGCTAAGATCTCTTAATGCTTGGTTTGGTCCAGCTGGAACAGTAACGCCATTACACCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGGAAGAAGTACGTTAGGCTTTACTCAGCATCTTTGTCTGAGGAACTTTATCCCTACTCGGAGACAATGCGTACCAATTCCAGCCAGGTTGACTTAGATGACATAGATGAAAGGAAGTTTCCTAAAGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGATATGTTATATATCCCACCAAAGTGGTGGCACTATGTGCGGTCCCTAACTACAAGTTTCTCAGTTAGCTTCTGGTGGAGTGAGGGTGAATGTTCAGATGCACCCTAA 1254 0.4936 MSSTTTPHGGDFDTPTLDMESAELLQTISEHGGYAYVRMASLAATGDVRAAEAALEMAWEQLHSGPWQSVLPVWRDAYSMACLHVARHHNGNGEFKEALRVLDMGIIMGGTLLRKDLDSAIEKVSERANSSRRVSEGSFEEGSVNNSEQRSLVHPEFHVSQVLQLLPIKSLSSKIVEKRSGLSLDKFLKDHYLAGTPVIISDCMVHWPAKTKWNNIDYLLRVAGDRTVPVEVGKNYLCTDWKQELITFSELLQRIKSNGGSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASLSEELYPYSETMRTNSSQVDLDDIDERKFPKVQDLEFVDCILEEGDMLYIPPKWWHYVRSLTTSFSVSFWWSEGECSDAP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0345 417 ProSiteProfiles JmjC domain profile. 275 417 IPR003347 -
Ahy3g0345 417 Pfam Cupin-like domain 186 409 IPR041667 -
Ahy3g0345 417 SMART cupin_9 266 416 IPR003347 -
Ahy3g0345 417 Gene3D Cupin 174 409 - -
Ahy3g0345 417 SUPERFAMILY Clavaminate synthase-like 176 409 - -
Ahy3g0345 417 PANTHER - 32 410 - -
Ahy3g0345 417 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 32 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0345 Ahy-Chr3 3610413 3614249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0345 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 24.916 2.15e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy3g0345 Cupin_8 3.20E-48 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0345 K24444 - gmx:100813075 694.115