LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy3g0335	ATGTCCACCAACGACATGGATTTCCCATTACCACCCTTACCCTCACCACCACCACCACCAACAACAACAACAACCCCTCACCCTCTTAACCTAGACAACCTTAAAGCCCTCAAAATCCTTGGCAAAGGTGCCATGGGCACCGTCTTCCTCGTCCACGACATCACCGCCACCTCTACCACCTTCTTCGCCCTCAAGGTCGTCGATAAAACCACCCACCACGGCAAGCTTGACGCCGACCGCCGCGCCCGCTGGGAAATCGAAGTCCTCTCCAAGCTCTCCAGCCACCCCTTCCTCCCTTCCCTCCTGGGCTCCCTCGACACTCCGGACTTCCTCGCCTGGGCCCTACCATACTGCCCCGGTGGCGACCTCAACCGCCTCCGCTACCGGCAAAACGACCGCGTGTTCTCCCCCTCCGTCATCCGGTTCTACCTCGCGGAGATTCTGTGCGCCCTCCACCACCTCCATTCCCTCGGTATCGCGTACCGTGACCTCAAACCGGAAAATGTCCTCATCCAACACAACGGTCACGTGACACTCACGGACTTCGACCTCTCACGCAAACTCACACCCAAAACCGTTGCAACAACCTCTCATACGGTTACAACAGTTGCAACTGACATTACCAACAAAGGTAACAGCATTCCGCCATCGGTTCCCACGGATCCTAATAAGATTCCATCAGAACCTCCTCATCGCAGGAGACACCGCCGGAACTTCACCCGCTGGTTCCCGCTCCACTCGCCGGATGCAGCTCGTAAGAACTTGAAGAAAGTGAAATCCGCCAGAGTCAGCCCCGTGAGTCGACGCAGGACGAGTTTCATCGGCGACGGCGAGAGGTCCAACTCGTTCGTCGGTACCGAGGAGTACGTGGCGCCGGAGGTGGTGCGCGGCGAGGGACACGATTTCGCCGTGGATTGGTGGGCGCTGGGGATTCTGGCGTATGAGATGATGTACGGTACGACGCCGTTTAAGGGGAAGAACCGCAAGGATACGTTCCGGAATGTGTTAGTGAAGTCGCCGGAGTTCGTTGGAAAACGGTCGTCGCTGACGGATCTCATCGAGAAGCTTCTGGAGAAGGAACCGACGGCGAGATTGGGGTACACTCGCGGAGCCGATGAGATCAAGGAGCACAAGTTCTTCCGAGGTGTAAGGTGGGACATGTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGGGAAGGAACGACGCCGGATCCCGTGAATCGATGGAGGGTTTGTTAGGTGGAGAGGGCGGCGTGAACATTAGAGATTATTTTCAAAGGTCGCGGTTGCCGCCGTCTTTGCCACCCTCGCCGTTGCCCTCGCCATCCGGCAAGTTCAAGAGGAATGTTTCTCTATCGGAATTCTAA	1368	0.5738	MSTNDMDFPLPPLPSPPPPPTTTTTPHPLNLDNLKALKILGKGAMGTVFLVHDITATSTTFFALKVVDKTTHHGKLDADRRARWEIEVLSKLSSHPFLPSLLGSLDTPDFLAWALPYCPGGDLNRLRYRQNDRVFSPSVIRFYLAEILCALHHLHSLGIAYRDLKPENVLIQHNGHVTLTDFDLSRKLTPKTVATTSHTVTTVATDITNKGNSIPPSVPTDPNKIPSEPPHRRRHRRNFTRWFPLHSPDAARKNLKKVKSARVSPVSRRRTSFIGDGERSNSFVGTEEYVAPEVVRGEGHDFAVDWWALGILAYEMMYGTTPFKGKNRKDTFRNVLVKSPEFVGKRSSLTDLIEKLLEKEPTARLGYTRGADEIKEHKFFRGVRWDMLTEVVRPPFIPGRNDAGSRESMEGLLGGEGGVNIRDYFQRSRLPPSLPPSPLPSPSGKFKRNVSLSEF*	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy3g0335	455	Pfam	Protein kinase domain	36	200	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy3g0335	455	Pfam	Protein kinase domain	276	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy3g0335	455	MobiDBLite	consensus disorder prediction	1	27	-	-
	Ahy3g0335	455	SUPERFAMILY	Protein kinase-like (PK-like)	16	397	IPR011009	-
	Ahy3g0335	455	MobiDBLite	consensus disorder prediction	424	455	-	-
	Ahy3g0335	455	ProSitePatterns	Protein kinases ATP-binding region signature.	40	65	IPR017441	GO:0005524
	Ahy3g0335	455	Gene3D	Phosphorylase Kinase; domain 1	32	117	-	-
	Ahy3g0335	455	MobiDBLite	consensus disorder prediction	207	238	-	-
	Ahy3g0335	455	SMART	serkin_6	34	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy3g0335	455	PANTHER	FLIPPASE KINASE 1-RELATED	29	429	-	-
	Ahy3g0335	455	MobiDBLite	consensus disorder prediction	9	25	-	-
	Ahy3g0335	455	Gene3D	Transferase(Phosphotransferase) domain 1	276	399	-	-
	Ahy3g0335	455	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	159	171	IPR008271	GO:0004672\|GO:0006468
	Ahy3g0335	455	Gene3D	Transferase(Phosphotransferase) domain 1	118	201	-	-
	Ahy3g0335	455	PANTHER	SERINE/THREONINE-PROTEIN KINASE UCNL	29	429	-	-
	Ahy3g0335	455	ProSiteProfiles	Protein kinase domain profile.	34	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy3g0335	Ahy-Chr3	3509197	3511017	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy3g0335	29	432	AGC Kinase Gene Family	AT1G51170	57.317	6.52e-154	441

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Ahy3g0335		Pkinase	1.00E-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy3g0335	-		K08286	adu:107476791	806.208