Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0334 ATGAACTCATCATCAAACAATAATAACTGGCTTTCGTTCCCTCTTTCACCAACTCATCATCAAGCCACTACTCAATATCATCAATTCCCTCTTGGCTTTGTCAACGACACCATCGAAAACCCTTTCCACAATCATGATTGGAATAATGTGATAAATGGTGGTGAGAGCAGCAATAAGAATGATCAAGTTCCAAAGGTAGCGGATTTCCTTGGTGTGAGGAAGGCAGAGGAAGATTCATCATCATCAGATCTTGTTGCCCTCACTACACACCTCTTCACCGGTAACAGTGTCTTGCCGTTGCAGCAAAACAACAACTATGAGGTGGAGGAGCAGCAGTTTCAAACAAATAATAATCTGCAAGCACTCACATTGTCCATGGGAAGTGGTAGTAATAATAATAATAATAATAATAAGGATTCATCAACAACCAGCTGTGACAATAACAGCATTATTGAAGCCCCACCTTCTAATAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACCGTGGCGTAACAAGACATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGCAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTGTATTTAGGTGGATATGATAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCATTGAAGTATTGGGGGACATCCACTACTACCAACTTTCCTATCAGCAACTATGAGAAGGAATTGGATGATATGAAACACATGACAAGGCAAGAATTTGTAGCCGCCATAAGAAGGAAAAGTAGTGGTTTCTCGAGAGGTGCATCAATGTATCGTGGAGTCACAAGGCATCACCAACATGGGAGATGGCAAGCAAGAATTGGAAGGGTAGCCGGAAACAAAGATCTTTACTTAGGAACATTTAGTACGGAAGAAGAGGCTGCAGAAGCTTATGACATAGCAGCCATAAAGTTCAGAGGCCTTAACGCCGTTACGAACTTCGACATGAGCCGTTACGACGTCAAAGCCATTCTTGAAAGCAACGCTCTCCCAATTGGAGGTGGTGCTGCTAAGAGATTGAAAGAAGCACAAGCTTTGGAATCTTCTAGAAAACGAGAACAGTTGCTTGCACTCGGAGCTGGTGCCTCTTCTTCTTCTTCTACTAGGTTCCCTTTCATGCAGCAGCACCACCAGTTCAATCAAGAGCTTCAGATTCAACCATTGTTAAACCTACAGAACCACGAGGTTTCTCATTATCAATTCATGCAGCAGGATCTTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCATCGTTGCTTCATCACAGTTATCTGCAAACGCAGATTCAGTTACACCAACAGAATGCTCAGTTTTACAACAGTTACCTTCATGGAATGATCAACATTGGTTCTTCTCCTTCTTCTTTTTCGCTCATGGATAACAATAATAATAATAATAATAACATGCTTGGTTTGGCTTCCAATAATTCTTCTTCCGAGGAACTTGCGTTGGTTAAGGTTGATTATGATATGAATCCTGGCGGTTATGGCGGTTGGCCAGGAACCACGGAGACAGCGTCGGAGTCTATGCAGGAACAAAGTGGCGGTGTTTTTACAATGTGGAATGATTAG 1620 0.421 MNSSSNNNNWLSFPLSPTHHQATTQYHQFPLGFVNDTIENPFHNHDWNNVINGGESSNKNDQVPKVADFLGVRKAEEDSSSSDLVALTTHLFTGNSVLPLQQNNNYEVEEQQFQTNNNLQALTLSMGSGSNNNNNNNKDSSTTSCDNNSIIEAPPSNRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKELDDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNALPIGGGAAKRLKEAQALESSRKREQLLALGAGASSSSSTRFPFMQQHHQFNQELQIQPLLNLQNHEVSHYQFMQQDLSSSSSSPSPSPSSLLHHSYLQTQIQLHQQNAQFYNSYLHGMINIGSSPSSFSLMDNNNNNNNNMLGLASNNSSSEELALVKVDYDMNPGGYGGWPGTTETASESMQEQSGGVFTMWND* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0334 539 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 9 538 - -
Ahy3g0334 539 Pfam AP2 domain 273 322 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 Pfam AP2 domain 170 228 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 Gene3D AP2/ERF domain 272 332 IPR036955 GO:0003700|GO:0006355
Ahy3g0334 539 Gene3D AP2/ERF domain 170 238 IPR036955 GO:0003700|GO:0006355
Ahy3g0334 539 SUPERFAMILY DNA-binding domain 271 332 IPR016177 GO:0003677
Ahy3g0334 539 MobiDBLite consensus disorder prediction 125 154 - -
Ahy3g0334 539 ProSiteProfiles AP2/ERF domain profile. 272 330 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 ProSiteProfiles AP2/ERF domain profile. 170 236 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 538 - -
Ahy3g0334 539 MobiDBLite consensus disorder prediction 417 436 - -
Ahy3g0334 539 SMART rav1_2 170 242 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 SMART rav1_2 272 336 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 SUPERFAMILY DNA-binding domain 169 238 IPR016177 GO:0003677
Ahy3g0334 539 MobiDBLite consensus disorder prediction 520 539 - -
Ahy3g0334 539 CDD AP2 169 238 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 PRINTS Ethylene responsive element binding protein signature 171 182 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 PRINTS Ethylene responsive element binding protein signature 312 332 IPR001471 GO:0003700|GO:0006355
Ahy3g0334 539 CDD AP2 271 332 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0334 Ahy-Chr3 3484167 3486938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0334 6 539 AP2-EREBP Transcription Factor Family AT3G20840 56.229 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy3g0334 AP2 6.10E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0334 K09285 - gmx:100788471 651.744