Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0329 ATGGTCATGGCAGATTCAACCTACAGCAACTCCAATAATGACTTTAATACTAACAACCTCCTTCTCTTGGATCTCAATTATTCTCCTTCTCCTTCTCCATCTTCTTCTCCTTCTACCAATTCCTTCAATTACTTTCATCCTCCACCAATCACAACAACACATCAACATCAACAACAACTAGATCTTCAATCTTCATTTTCTGCCATGGAAGTTCACAACAACAATAACAATAAGGTGCCTCTACACTTAGGGCTTCAAAGCACGGTAGTAGTACAAGATTCTTCAGTATTAGAAGAAGATGAAGAAGAAGAAAAAATCACTGTTGCTTCTGAATATGTTATGTCAAATGGAATTAACAGAGGACAGTATTGGATCCCAACACCTACTCAGATCCTCATCGGTCCTACACAGTTCGCATGCCCCCTTTGCTTCAAAACCTTCAACAGATACAATAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGTCCAGAATCTCTAAGGGGAACACAACCAACAGCAATGTTGAAACTGCCATGTTATTGCTGTGCAGCAGGATGCAAGAACAACATAGACCACCCTAGAGCAAAACCACTCAAAGATTTCAGAACCCTTCAAACTCATTACAAGAGAAAGCATGGACTTAAACCCTTCACTTGTAGGAAGTGTTCCAAGGCATTTGCTGTGAGAGGTGATTGGAGGACTCATGAGAAGAATTGTGGGAAGCGATGGTATTGCTCTTGTGGCTCTGATTTTAAGCACAAGAGATCCCTTAAGGATCATATCAAGGCATTTGGAAATGGACACAAATCTTATGCAATTAATGACCATCTTTGTGTTGATCAAGATGATAATAATGGAGCTGCCTCTGAAGTTGAAGAAAATGATTCATTCCACTCCTAG 915 0.4022 MVMADSTYSNSNNDFNTNNLLLLDLNYSPSPSPSSSPSTNSFNYFHPPPITTTHQHQQQLDLQSSFSAMEVHNNNNNKVPLHLGLQSTVVVQDSSVLEEDEEEEKITVASEYVMSNGINRGQYWIPTPTQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAAGCKNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFTCRKCSKAFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGNGHKSYAINDHLCVDQDDNNGAASEVEENDSFHS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0329 304 PANTHER ZINC FINGER PROTEIN WIP2 35 299 IPR043584 GO:0003700|GO:0010468
Ahy3g0329 304 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Ahy3g0329 304 SUPERFAMILY beta-beta-alpha zinc fingers 133 160 IPR036236 -
Ahy3g0329 304 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
Ahy3g0329 304 SUPERFAMILY beta-beta-alpha zinc fingers 204 242 IPR036236 -
Ahy3g0329 304 SMART c2h2final6 222 242 IPR013087 -
Ahy3g0329 304 SMART c2h2final6 138 160 IPR013087 -
Ahy3g0329 304 Gene3D Classic Zinc Finger 181 271 - -
Ahy3g0329 304 PANTHER ZINC FINGER PROTEIN WIP2 35 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0329 Ahy-Chr3 3446037 3448071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0329 99 303 C2H2 Transcription Factor Family AT3G57670 76.098 1.25e-117 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy3g0329 None None None