Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0322 ATGAGGAAGCCTAGTGAGCAATCATCATCATCGAAAAACAACAAGTTGAGAAAAGGGTTGTGGTCACCGGAGGAAGATGACAAGTTGATGAACTACATGATGAACAATGGACAAGGTTGTTGGAGTGATGTTGCTAGGAATGCGGGCCTCCAAAGGTGTGGTAAGAGTTGTCGCCTTCGATGGATCAATTATCTCAGACCTGACCTTAAACGTGGTGCATTCTCTCCCCATGAACAACAACTCATCATCCATTTCCACTCCCTTCTTGGAAACAGATGGTCACAAATAGCTGCGCGTTTACCTGGAAGAACCGACAATGAAATCAAGAACTTTTGGAATTCAACAATCAAGAAAAGACTCAAGCAGCAGCAGCAGCAATCAACTACTTCACCAAATGCAAGCGATGATCATGATTATTCCTCTTATGACCCTAACAACAACAACAAAGACCTCAACATTGTAGGAGGAGGAGAAGGGCTTAATAGTAATTCTACTACACAACAATTTCATCAACACCATCTTCATTTTATGCCACTAGTGTTCAATTCTTCTTCTTCTTCATCATCATCATCAATGCAAAACACAGTTCTCAACACCATAATTGACAGGTTGCCTATGCTAGATCATGGTCTTAACATTCCACCAGCTAATGGATTCAACAACAAAGGCTTTTATGATTTGGAAAATGGTGTGATTGGGGGTGTAGATAATAATAATAATAATATTAATAATCTTGGGGCTGAAGAAGTAGTAGTAGGGGATAATACATATACTAATACTAACACTTTTTCTGACCATGATAATAATAACCTAAAAGTGTTGGAGAGTGCATGCATTAATAACAATACTAATTACTTTGATGACATAAACAACAAGATCATGAAGGGTGGGGTGGTGGAGAATTTGTTTCATGAAGAGTTGACCTTGGGAGAGTGGGACTTGGAAGAATTCATGAAAGATGTTACATCTTTTCCCTTTCTTGCTGATTTTTCAAATTGA 999 0.3864 MRKPSEQSSSSKNNKLRKGLWSPEEDDKLMNYMMNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPHEQQLIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKQQQQQSTTSPNASDDHDYSSYDPNNNNKDLNIVGGGEGLNSNSTTQQFHQHHLHFMPLVFNSSSSSSSSSMQNTVLNTIIDRLPMLDHGLNIPPANGFNNKGFYDLENGVIGGVDNNNNNINNLGAEEVVVGDNTYTNTNTFSDHDNNNLKVLESACINNNTNYFDDINNKIMKGGVVENLFHEELTLGEWDLEEFMKDVTSFPFLADFSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0322 332 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Ahy3g0322 332 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Ahy3g0322 332 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Ahy3g0322 332 MobiDBLite consensus disorder prediction 118 167 - -
Ahy3g0322 332 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g0322 332 Gene3D - 15 71 - -
Ahy3g0322 332 Gene3D - 72 142 - -
Ahy3g0322 332 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Ahy3g0322 332 CDD SANT 21 65 IPR001005 -
Ahy3g0322 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Ahy3g0322 332 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Ahy3g0322 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Ahy3g0322 332 PANTHER MYB DOMAIN PROTEIN 55 10 331 - -
Ahy3g0322 332 PANTHER MYB TRANSCRIPTION FACTOR 10 331 - -
Ahy3g0322 332 SMART sant 17 67 IPR001005 -
Ahy3g0322 332 SMART sant 70 118 IPR001005 -
Ahy3g0322 332 CDD SANT 73 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0322 Ahy-Chr3 3365800 3369030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0322 3 330 MYB Transcription Factor Family AT3G08500 44.868 4.44e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g0322 Myb_DNA-binding 1.10E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0322 K09422 - gmx:100785810 351.673