Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0296 ATGGGTGAGGAAGTTAGGATGACCGACTACCAAGACGACGACGGAGTCGCCGACTGGGAATTGGGCCTTCCGGCGGCCCACGATCTCACCCCGCTCTCTCAGCTCTTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCGGAGCCACACCGTTCCCTTGTCGACGTTAACCGCGCCTCAAAGAACACTTTCTCCACCCTCCGTACCGGCGTCAACGCCTTCTCCTCCTCCAACCTCAACCCCTTCCAAGACGAGGGAAACGATCCCGCCGGCGACGACGAGGAAGAGATCGATCCGGCCGGTTCGGGATCCAATTCGAGGAAGCTCCGGAAGGTTGATTGTGCGGAGGAAGCGGATTCTGTGCCGCGCACCGACAGTGCTGCCGCCGTGAAGCGACCGAGGCTTGTGTGGACACCGCAGCTGCACAAGCGATTTGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGCTTATGAACGTGGAAGGGTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTATCGCCTCTATCTTAAGCGGATGCAAGGGCTCTCCGCCGACGGACCTTCTTCCTCCGACCACCTCTTCGCCTCCACGCCGGTTCCTCAAAGCCTCAATGACAGCGGCGGAGGAGGAGCAGGAGGAGGTGGAAGTGGCCACTCCCGTGGGAACGGGCACCTTCCGGTTCCGGTCCCGATGCATTATCCTCCGGCGGCAATGATGCCAATGCCGATGCTCAGCATGCCACATGGCTTTCATCATCACCATGTGTTGCAGCAGAGGGATTGGTCCTACCCACCACATGTCACTCCTAATGATAAATGA 858 0.6014 MGEEVRMTDYQDDDGVADWELGLPAAHDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASKNTFSTLRTGVNAFSSSNLNPFQDEGNDPAGDDEEEIDPAGSGSNSRKLRKVDCAEEADSVPRTDSAAAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSADGPSSSDHLFASTPVPQSLNDSGGGGAGGGGSGHSRGNGHLPVPVPMHYPPAAMMPMPMLSMPHGFHHHHVLQQRDWSYPPHVTPNDK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0296 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 190 IPR017930 -
Ahy3g0296 285 SUPERFAMILY Homeodomain-like 132 191 IPR009057 -
Ahy3g0296 285 MobiDBLite consensus disorder prediction 199 242 - -
Ahy3g0296 285 Pfam Myb-like DNA-binding domain 138 186 IPR001005 -
Ahy3g0296 285 Gene3D - 131 193 - -
Ahy3g0296 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 275 IPR044841 GO:0003700|GO:0006355
Ahy3g0296 285 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Ahy3g0296 285 MobiDBLite consensus disorder prediction 199 217 - -
Ahy3g0296 285 MobiDBLite consensus disorder prediction 77 130 - -
Ahy3g0296 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0296 Ahy-Chr3 3154016 3155405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0296 1 267 G2-like Transcription Factor Family AT3G46640 51.890 8.85e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy3g0296 Myb_DNA-binding 1.10E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0296 - - aprc:113858844 339.732