Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0273 ATGGGAATTTGTTTGAGCAACCAAATTAAAGCTGAGACCCCATATAACACTGGGTTAAGTTCAAAGAATGTTGGTAGCCATAGAAATGATCTCAGCAACCAAAATAGTAAGGTGTCAACGGTTTCAATGCCTCAAAATCCACGAACTGAGGGTGAGATCTTGCAGTCACCGAATCTAAAGAGCTTTACTTTGATAGAACTTAAGGCTGCAACAAGAAATTTTCGTCCGGACAGCGTCTTGGGAGAAGGTGGATTTGGATCAGTTTTTAAGGGATGGATTGATGAGCAGACATTTGCAGCTGCTAAACCTGGCACTGGCATTGTTATTGCTGTGAAGAAACTTAATCAGGATGGTTTCCAAGGTCACAAGGAGTGGTTGGCTGAAGTGAACTATCTAGGCCAGCTTTCTCATCCCCATCTGGTGAAATTGATTGGGTATTGTCTTGAAGATGAACACCGCCTTCTAGTCTACGAATTCATGCCTCGTGGAAGCTTGGAGAATCATTTGTTCAGGAGAGGCTCATATTTTCAACCTCTTTCGTGGTGCCTTCGCTTGAAGGTCGCACTTGGTGCTGCAAAAGGGCTTGCATTTCTTCATAGTGCCGAAACAAAAGTGATATATAGGGACTTCAAGACTTCAAATGTGTTGCTTGATTCAAATTATAATGCAAAACTTTCTGATTTCGGTTTGGCGAAGGATGGCCCTACTGGTGACAAAAGTCATGTCTCCACAAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCAACTGGTCATCTCACTGCTAAGAGTGATGTCTTTAGTTTTGGAGTTGTCCTATTGGAAATGTTATCAGGCCGGAGGGCTGTTGATAAGAACCGTCCTTCTGGGCAGCACAACTTGGTGGAATGGGCGAAGCCATACCTTGCGAACAAGCGCAAGGTTCATCGAGTGATAGATAACCGTCTAGAAGGCCAATACTCTCCAGATGAGGCCTTTAAGGTAGCTGTCCTTGCACTAAGGTGCCTAGCACCAGAGTCCAAGCTGAGGCCAAGCATGGATGAAGTTGTTAGCAGTTTGGAGCAGCTTCAGATTGTCAATGTAAATCAGAATCGTCCTGGCAATGGCCATAGAGTTCGCAGAAGAAGCGCCGATGATGCTAAACCTGGGAGAATTAGCACCGCATATCCTCGGCCATCTGCAACTGCACTCTGCACTTGA 1209 0.4508 MGICLSNQIKAETPYNTGLSSKNVGSHRNDLSNQNSKVSTVSMPQNPRTEGEILQSPNLKSFTLIELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTFAAAKPGTGIVIAVKKLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWCLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVFSFGVVLLEMLSGRRAVDKNRPSGQHNLVEWAKPYLANKRKVHRVIDNRLEGQYSPDEAFKVAVLALRCLAPESKLRPSMDEVVSSLEQLQIVNVNQNRPGNGHRVRRRSADDAKPGRISTAYPRPSATALCT* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0273 402 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Ahy3g0273 402 PANTHER OS01G0588500 PROTEIN-RELATED 25 376 - -
Ahy3g0273 402 MobiDBLite consensus disorder prediction 366 402 - -
Ahy3g0273 402 CDD STKc_IRAK 80 359 - -
Ahy3g0273 402 ProSitePatterns Protein kinases ATP-binding region signature. 80 113 IPR017441 GO:0005524
Ahy3g0273 402 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 25 376 - -
Ahy3g0273 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Ahy3g0273 402 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Ahy3g0273 402 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Ahy3g0273 402 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0273 402 MobiDBLite consensus disorder prediction 15 52 - -
Ahy3g0273 402 SUPERFAMILY Protein kinase-like (PK-like) 47 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0273 Ahy-Chr3 2953233 2956003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0273 44 356 Glycoside Hydrolase AT3G07070 49.538 3.89e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy3g0273 PK_Tyr_Ser-Thr 3.20E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0273 - - qsu:111987244 650.203