Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0262 ATGGAGGACGGAGGGAGTTCAAGGTGGAACCCTACGAAGGAGCAGATAAGCATGTTGGAGAATCTTTATAAGCAGGGAATAAGAACACCAAGCGCTGAAGAGATTCAGCAAATAACAGCGAGGTTGAGAGCCTATGGTCACATCGAAGGCAAGAACGTCTTCTACTGGTTTCAGAATCACAAAGCCAGACAGAGACAGAAGCAGAAGCAACACACTCTCGCTTACTTCAATCGCTCTTTTCTCCATCATCATCATCAACCTGCAGTTATGTGTGGTCCGTATTGCATGGTAGGTACGATGAGGAGAATCCCCGATAATAATCATAGCGAAGATGAAACAATGTTTGATAAGCAACAAGATAGAACGTTGGATCTTTTCCCTCTTCACCCAACTGGCATATTGGAAGGGAAGAAGGAAACACAAGATAACAACAACAACAACATGATGACCATGATGTGCTCTTTCATGGCGCCTTCTTCTTCATCATCGTCTGATACTACTCATGATGATGGACATGGCTATAGGCACCAACAACAACAACTACCCTTCTTTGATTTCTTCGTCACTTCTGGACATGGACAAGGATCGTTTGAGAGTGGCTAA 603 0.4395 MEDGGSSRWNPTKEQISMLENLYKQGIRTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQHTLAYFNRSFLHHHHQPAVMCGPYCMVGTMRRIPDNNHSEDETMFDKQQDRTLDLFPLHPTGILEGKKETQDNNNNNMMTMMCSFMAPSSSSSSDTTHDDGHGYRHQQQQLPFFDFFVTSGHGQGSFESG* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0262 200 SUPERFAMILY Homeodomain-like 4 73 IPR009057 -
Ahy3g0262 200 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Ahy3g0262 200 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 107 192 - -
Ahy3g0262 200 CDD homeodomain 8 68 IPR001356 GO:0003677
Ahy3g0262 200 Gene3D - 6 75 - -
Ahy3g0262 200 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 97 IPR044555 GO:0003700|GO:0099402
Ahy3g0262 200 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 107 192 IPR044555 GO:0003700|GO:0099402
Ahy3g0262 200 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 4 97 - -
Ahy3g0262 200 SMART HOX_1 4 71 IPR001356 GO:0003677
Ahy3g0262 200 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0262 Ahy-Chr3 2842252 2843477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0262 6 82 Wox Gene Family AT5G59340 84.416 8.96e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy3g0262 Homeodomain 2.30E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0262 - - ahf:112736626 358.221