Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0238 ATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGAAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACACAATCATCTCCATCATCTTCGTCTACTAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGGTAATAACAACAACATCACTAATAACACGATGGTGAAAGAAGATGATGGAATAATAATTAATAGTGATAGTAACAATGTTGTTGATGATGATTACTCTATGGATGATATATGGAATGATATCGCCATGTCTGAACAACACAACAACTTTATTTCTTCTTCTTCTTCTTCTTCAGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAAGTAAAGTCTTATTCCCTTCTTCCTATGAACCACTCTTAACCACTTAA 543 0.4015 MSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNGNNNNITNNTMVKEDDGIIINSDSNNVVDDDYSMDDIWNDIAMSEQHNNFISSSSSSSEPLPLWMIMDNQEQEQSKVLFPSSYEPLLTT* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0238 180 MobiDBLite consensus disorder prediction 43 100 - -
Ahy3g0238 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Ahy3g0238 180 Pfam Myb-like DNA-binding domain 2 41 IPR001005 -
Ahy3g0238 180 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 1 152 - -
Ahy3g0238 180 SMART sant 1 45 IPR001005 -
Ahy3g0238 180 MobiDBLite consensus disorder prediction 53 100 - -
Ahy3g0238 180 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Ahy3g0238 180 SUPERFAMILY Homeodomain-like 2 47 IPR009057 -
Ahy3g0238 180 CDD SANT 1 41 IPR001005 -
Ahy3g0238 180 Gene3D - 2 76 - -
Ahy3g0238 180 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 152 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0238 Ahy-Chr3 2660456 2661566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0238 1 132 MYB Transcription Factor Family AT3G46130 47.143 6.67e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy3g0238 Myb_DNA-binding 2.50E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0238 K09422 - sind:105170384 123.25