Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0237 ATGTCTCAAACCTTTGATTACCTGGCTGATTTAAATGCAAGAAAACTGCAATGGAATTTCAAAGTATATGTAATACGTGTGTGGGAACTCCCTAACAGATACAATGAAGGAGAAGTTGGCACCATTGAAGTGATTATTGAAGATAGTCAGGGCACAAGGTTGCAAGTCTCGATCCCTAAATCCCTGGTGAGCAAGTGGCGGGGTGTCTTGGTTCAGTTTCAAATGTACATTATGACCAACTTCATTGTTGTTGACAACCAAAAGGGTAACATATCAAGGGGAAAGTATTTATTATTCTTCAGTCATAGGACAATCGTCAGTCATGTTGAGAATCCCAGTTTTTCGCTAAATGCTTTTCGATTTAGAACCATCCGTGAGTTACTAAATGCTGAGAAGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTGATCACCAGCAAAGGAAAGGAGACTAAACGACTGGCTGTTATCTTGGAGGACCTAGAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCGTCACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACCAGATGGAATGGCAAGACATCTGTCCAAAGCCATTTTGACATTTCACAGCTGCACATAGACTCCAACCTTAAAGATGTTGCTGAATTTAGGAGCAGGCTGCTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGTTCCATCAAAAACAGCTTGGTCAGGGGTTGAGGAGCTTAAACAAGGTGCTGTGTCAGTGAAAACAATTGAAGAAGTCCTTATCCAACATGAGATTGGTTGCTGA 876 0.4144 MSQTFDYLADLNARKLQWNFKVYVIRVWELPNRYNEGEVGTIEVIIEDSQGTRLQVSIPKSLVSKWRGVLVQFQMYIMTNFIVVDNQKGNISRGKYLLFFSHRTIVSHVENPSFSLNAFRFRTIRELLNAEKIDDSALFDMIGEVVGKEDPKELITSKGKETKRLAVILEDLENNRIGCTIFGEMVDQLLRHMQDGRVEPLIVVVQYFKATRWNGKTSVQSHFDISQLHIDSNLKDVAEFRSRLLGGEPSSSVRISQVPSKTAWSGVEELKQGAVSVKTIEEVLIQHEIGC* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0237 291 Gene3D - 4 108 IPR012340 -
Ahy3g0237 291 SUPERFAMILY Nucleic acid-binding proteins 120 244 IPR012340 -
Ahy3g0237 291 SUPERFAMILY Nucleic acid-binding proteins 5 114 IPR012340 -
Ahy3g0237 291 PANTHER REPLICATION FACTOR A 1, RFA1 22 252 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy3g0237 291 CDD RPA1_DBD_B_like 140 244 - -
Ahy3g0237 291 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 22 252 - -
Ahy3g0237 291 Pfam Domain of unknown function DUF223 43 112 IPR003871 -
Ahy3g0237 291 Gene3D - 114 250 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0237 Ahy-Chr3 2658731 2660062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0237 8 257 Core DNA Replication Machinery Family AT2G06510 23.372 3.82e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0237 - - ahf:112803472 561.607