Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0214 ATGTATAACTGTAACGGCACATTCTGTTACGCCAATAACGACGACCATTTCCATCACATGATCACGCCAATGCATTCGTCGTCGTCGACCGGAGCCGCATCTCATCAATGGCAATTGATGATCACGAACCCGTCGGAAGCGAGCATGAGCGCAAGCAGCGGGTGTAGCACGCCGAGTTCGTTGGCGAGTTGCGGTGACACCACGAGTCAGCGCGTGAGCGCCACGAAGATGCACAAGAGCGTGAGTAGCCACTCGCTGTTGTTGCAGAATAACAATAGCAGTGGGGTCCACCACAACCGTAATCAGTTGTATCCATCCTTCTCTGCTCTTTTCTGTGAGTTTCTTAATTCCGATGACGCTCCCGTTCGCAGGGTTTACAGCACCGGTGATCTTCAGGAAGATACTTCACTATCAAGTGAGAGTAGTATGATAATAGAAGCAATGAGCAGAGCCAGTCCCTATAGCCCTGAAGAGAAGAAGATAAGAATTGAGAGATACAGAATCAAGAGAAACCAGAGGAACTTCAACAAGAAAATCAAGTATGCTTGTAGAAAAACATTGGCGGATAGCCGGCCGCGAATTAGAGGAAGATTTGCAAAGAATGATGAAATTGTGAGAAACCCTCCATCACTTGAATGGTGCCAATTTGGTGCTGCTGGGGAGGAACAAGATGAAGAAGATGAGAATAATTGGGCCAATTTATTTGATTCCTTAGACCCTGCAAATGTTGTTGCTCATCATCATCAAGAGCAACAAGATAGTTCCCCTTTCGGTGTATTCTACTAA 786 0.4644 MYNCNGTFCYANNDDHFHHMITPMHSSSSTGAASHQWQLMITNPSEASMSASSGCSTPSSLASCGDTTSQRVSATKMHKSVSSHSLLLQNNNSSGVHHNRNQLYPSFSALFCEFLNSDDAPVRRVYSTGDLQEDTSLSSESSMIIEAMSRASPYSPEEKKIRIERYRIKRNQRNFNKKIKYACRKTLADSRPRIRGRFAKNDEIVRNPPSLEWCQFGAAGEEQDEEDENNWANLFDSLDPANVVAHHHQEQQDSSPFGVFY* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0214 261 Pfam CCT motif 162 201 IPR010402 GO:0005515
Ahy3g0214 261 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 43 261 IPR045281 GO:0009909
Ahy3g0214 261 ProSiteProfiles CCT domain profile. 159 201 IPR010402 GO:0005515
Ahy3g0214 261 PANTHER CCT MOTIF PROTEIN 43 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0214 Ahy-Chr3 2443521 2445844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0214 150 200 C2C2-CO-like Transcription Factor Family AT5G24930 54.902 7.74e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy3g0214 CCT 6.60E-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0214 - - adu:107477092 484.567