Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0210 ATGGAGGAGAAAACATCGTCGTCGCCGTCAAACAGAACGACGTCGTTTCGGGGAGACCCTAGCGGCACGCTCCAAGTGTTGTCCAACCCTTCTTCGAACGAGAAACCGCCGCAAATCTCATCGCCGTTGCGATCTCAGGCTTCGAAATCTGCTCCTTCAGAAGCGTCCATTCCGTCGGAGGCGGCGGCGCAGAGGGCAGCGGAGTGGGGACTGGTGCTGAAGACAGACGAGGAGACAGGAAAGCCGCGGGGAGTGGCGCCTCGGACATCAGGCGGGGAGGTTGGCGGCGGAGCGAGTAGCAGCAGCAGTAGTAGTAGAGAAGTGAGGGTGGCGCGTGGAGTGCCACGTGTATCGGAGGATGTTAGAGCTGCGCTGTCGACGTTTCAACAGACGTTCGTAGTTTCGGACGCGATGAAAGCAGATTATCCGATTCTGTATGCGAGTGCTGGATTCTTCAAGATGACTGGTTATACCTCCAAAGAAGTCATTGGCAGAAACTGTCGGTTTTTACAGGGGGCAGATACAGATCCAGCTGACGTGGCAAAGATAAGGGAAGCTCTGAACATGGGGACAAGTTATTGTGGAAGGTTGCTTAACTACAAGAAAGATGGCACTCCCTTTTGGAACCTTCTCACTATTTCTCCAATCAAAGACCATGATGGAAATGTCCTCAAATTTATCGGAATGTTAGTGGAGGTTAGCAAGCACACAGAGGGGTCAAAGGAAAACATGTTACGCCCCAATGGCCTCCCTGAATCATTGATTCGATATGCCGCTAGAGAGAAAGAGAAGGCAGGGAATTCAGCAAGAGAGTTAGTGGAAGCCATGAAGATGAAGATGAAGAGGCTCAGTGAATCAAACACAAACTCTAATGAGTCCAATAATAATAATAAGAAGAACAACAAAGCAGCTCCTCCAAGATCATCATTATTAAGAAGAAAATCAGATAGTAGCATCATTACTTCTTCTACACGTAAATCACTTTCAGAACACTCTAGAAGCAACTCAATGCTCTCTCGCGTTCCTCCTCTTCCTCCTAACAACAACAAACATACTAAGACTACCTCCCGCCGTCGCCTTTCTTTCATCGGGTTAATTAGGAAAAGTATGTCGAACTATGAAAGTTTTAACTATGAAGCTGATGAGGACAGTGACGAAGAGGATGATAATGATAATAAAGAAGAAGATTATGACGACTGTAATGTGGGGGAAAAGAGAAAGGGGTTTGATCTTGCTACCACACTCGAACGCATTGAGAAGAACTTCGTCATTACTGATCCAAGGCTACCTGATAACCCTATAATCTTTGCATCTGATAGCTTCTTGGAACTTACAGAGTATAGTAGAGAAGAGATCTTGGGAAGAAATTGCAGATTTCTGCAAGGACCTGAAACTGATCGAGCTACAGTGAGAAAAATTAGGGAGGCCATTGACAACCAAATAGAAATTACTGTGCAGCTCATTAATTATACAAAGAGTGGTAAGAAGTTTTGGAATTTGTTTCATTTGCAACCTATGCGAGATCAGAAGGGAGAAGTTCAGTATTTTATTGGTGTTCAACTTGATGGTAGCCAACAATTGGAACCTCTTCACAACTGCATTGCAGATGATACTGCCAAAGAGGGACAATTATTGGTAAAACAAACTGCTGAAAATGTTGATGATGCTGTTAGAGAACTTCCAGATGCTAATATGAAACCAGAAGATCTATGGATGAACCATTCAAAAGTTGTTCACCCTAAACCTCATAGAAAAGATGCTGCTGCTTGGGCAGCTATTCAAAAGATTTTGGATAGTGGAGAACAGATAGAGTTGAAGCATTTTAGGCCGATAAAACCTTTGGGAACAGGAGATACTGGCAGTGTGTATTTGGTGGAGCTATGTGGAAGTGGACAATACTTTGCAATGAAGGCAATGCAGAAAGATGTGATGATGAATCGAAACAAGGTGCATAGAGCTTCCACTGAGAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACTCAAACCCATGTTTGTTTGATAACTGATTACTGCCCTGGTGGTGAATTATTCCTACTTCTTGATCGCCAGCCATCTAAGGTTCTCAAGGAAGATGCTGTCAGATTTTATGCTGCCGAGGTAGTGGTTGCGTTGGAGTACCTTCATTGTCAAGGAATAATTTACCGAGATTTGAAGCCAGAGAATGTGTTACTTCAGAGCAATGGACATGTTTCTCTAACAGATTTTGATTTATCATGTTTAACATCTAGCAAACCACAGCTTATAACTCCAACTACAAATGAAAAGAAGAAACATCAAAAAGGTCCAGAAACTCCAATATTTTTGGCAGAACCTATAAGAGAATCAAATTCTTTTGTTGGCACAGAAGAGTATATAGCTCCGGAAATTGTAACTGGTGCAGGCCATACTAGTGCTGTTGATTGGTGGGCTCTAGGAATTCTTTTATATGAAATGCTTTATGGATTTACGCCATTCAGAGGAAAGAATAGGCAAAAAACATTTACAAATATTCTCAATAAGGATCTTAAGTTTCCCAAAAGTAAACAGGTAAGTCTACATGCAAAGCATTTAATATATGGATTGTTACAAAAAGATCCAAAAAGTAGAATGGGTTCACAAGGAGGAGCTAATGAAATTAAGACACACTCATTTTTTCGTGGTGTCAATTGGGCTCTCGTCAGATGCATGAATCCTCCTACACTTGATGCTCCTCTATTTGAGAAAACTGAGGAAGAAGAAGAAGAAGAGCAAGTAAAAGATGTAAATTCAGACATAGAAGAAATAAATATCTTTTAG 2826 0.4232 MEEKTSSSPSNRTTSFRGDPSGTLQVLSNPSSNEKPPQISSPLRSQASKSAPSEASIPSEAAAQRAAEWGLVLKTDEETGKPRGVAPRTSGGEVGGGASSSSSSSREVRVARGVPRVSEDVRAALSTFQQTFVVSDAMKADYPILYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPADVAKIREALNMGTSYCGRLLNYKKDGTPFWNLLTISPIKDHDGNVLKFIGMLVEVSKHTEGSKENMLRPNGLPESLIRYAAREKEKAGNSARELVEAMKMKMKRLSESNTNSNESNNNNKKNNKAAPPRSSLLRRKSDSSIITSSTRKSLSEHSRSNSMLSRVPPLPPNNNKHTKTTSRRRLSFIGLIRKSMSNYESFNYEADEDSDEEDDNDNKEEDYDDCNVGEKRKGFDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVRKIREAIDNQIEITVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQQLEPLHNCIADDTAKEGQLLVKQTAENVDDAVRELPDANMKPEDLWMNHSKVVHPKPHRKDAAAWAAIQKILDSGEQIELKHFRPIKPLGTGDTGSVYLVELCGSGQYFAMKAMQKDVMMNRNKVHRASTEREILDMLDHPFLPALYASFQTQTHVCLITDYCPGGELFLLLDRQPSKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSSKPQLITPTTNEKKKHQKGPETPIFLAEPIRESNSFVGTEEYIAPEIVTGAGHTSAVDWWALGILLYEMLYGFTPFRGKNRQKTFTNILNKDLKFPKSKQVSLHAKHLIYGLLQKDPKSRMGSQGGANEIKTHSFFRGVNWALVRCMNPPTLDAPLFEKTEEEEEEEQVKDVNSDIEEINIF* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0210 941 SMART serkin_6 608 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0210 941 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Ahy3g0210 941 Gene3D Phosphorylase Kinase; domain 1 607 691 - -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 378 397 - -
Ahy3g0210 941 Pfam Protein kinase domain 610 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0210 941 ProSitePatterns Protein kinases ATP-binding region signature. 614 637 IPR017441 GO:0005524
Ahy3g0210 941 MobiDBLite consensus disorder prediction 1 110 - -
Ahy3g0210 941 ProSiteProfiles PAC domain profile. 191 245 IPR000700 -
Ahy3g0210 941 PANTHER PHOTOTROPIN-1 83 936 - -
Ahy3g0210 941 Pfam PAS domain 430 522 IPR000014 -
Ahy3g0210 941 Pfam PAS domain 140 234 IPR000014 -
Ahy3g0210 941 PANTHER FLIPPASE KINASE 1-RELATED 83 936 - -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 283 304 - -
Ahy3g0210 941 CDD PAS 144 233 IPR000014 -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 94 108 - -
Ahy3g0210 941 CDD STKc_phototropin_like 606 914 - -
Ahy3g0210 941 ProSiteProfiles Protein kinase domain profile. 608 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0210 941 ProSiteProfiles PAS repeat profile. 411 480 IPR000014 -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 7 57 - -
Ahy3g0210 941 SMART pac_2 484 526 IPR001610 -
Ahy3g0210 941 SMART pac_2 194 236 IPR001610 -
Ahy3g0210 941 Gene3D PAS domain 131 299 - -
Ahy3g0210 941 SUPERFAMILY PYP-like sensor domain (PAS domain) 140 230 IPR035965 -
Ahy3g0210 941 Gene3D PAS domain 399 560 - -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 283 360 - -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 311 351 - -
Ahy3g0210 941 TIGRFAM sensory_box: PAS domain S-box protein 432 522 IPR000014 -
Ahy3g0210 941 TIGRFAM sensory_box: PAS domain S-box protein 143 238 IPR000014 -
Ahy3g0210 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Ahy3g0210 941 SMART pas_2 119 188 IPR000014 -
Ahy3g0210 941 SMART pas_2 409 478 IPR000014 -
Ahy3g0210 941 CDD PAS 422 522 IPR000014 -
Ahy3g0210 941 SUPERFAMILY Protein kinase-like (PK-like) 594 915 IPR011009 -
Ahy3g0210 941 ProSiteProfiles PAC domain profile. 481 535 IPR000700 -
Ahy3g0210 941 Gene3D Transferase(Phosphotransferase) domain 1 692 909 - -
Ahy3g0210 941 SUPERFAMILY PYP-like sensor domain (PAS domain) 423 522 IPR035965 -
Ahy3g0210 941 MobiDBLite consensus disorder prediction 378 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0210 Ahy-Chr3 2369579 2379154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0210 61 941 AGC Kinase Gene Family AT3G45780 66.556 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ahy3g0210 Pkinase 9.30E-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0210 K20715 - gmx:100817565 1251.11