Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0192 ATGGAGGGAAGTGACACTAACAACACCACCTACTCTAACTCTACTTCTACTTCTTCTGGTGATCCTCCTCCTCCGGCGGCGGCAACGGTGGCGGTTGTAATGAGCCCTTGTGCAGCATGCAAGATCTTGAGGCGAAGATGCACGGAGAAATGCATGCTTGCGCCATATTTCCCTCCCACCGAGCCTACCAAGTTCACCATTGCTCATAGGGTCTTTGGCGCTAGCAACATCGTCAAGTTCTTGCAGGAGATTCCGGAATCTCAAAGAGCTGATGCAGTGAGTAGCATGGTGTATGAGGCAAGTGCAAGAATAAGGGACCCAGTTTATGGTTGTGCAGGTGCAATTTGCCAGCTTCAGAAGCAAGTCAATGAGCTTAGAGCACAATTGGCAAAAACACAAGCTGAGGTTGCAACCATGCAATTTCAACAAGCCAACCTTGTTGCCCTAATTTACATGGAAATGGCACAACAACAAAGTTCCCAACAACAACAACAAGAGTTTGAATCATCACCTCAGCAATCATCAATGGAAGATTTCAATGTTCCAAGCCCTCACTATCAACAAAGTAACATCAACTACTTTGAGGATAACCCTAGCCTCAATTCATTGTGGGAGCCGCTCTGGACATGA 630 0.4683 MEGSDTNNTTYSNSTSTSSGDPPPPAAATVAVVMSPCAACKILRRRCTEKCMLAPYFPPTEPTKFTIAHRVFGASNIVKFLQEIPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELRAQLAKTQAEVATMQFQQANLVALIYMEMAQQQSSQQQQQEFESSPQQSSMEDFNVPSPHYQQSNINYFEDNPSLNSLWEPLWT* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0192 209 MobiDBLite consensus disorder prediction 160 182 - -
Ahy3g0192 209 Coils Coil 115 142 - -
Ahy3g0192 209 MobiDBLite consensus disorder prediction 1 25 - -
Ahy3g0192 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 19 206 - -
Ahy3g0192 209 ProSiteProfiles LOB domain profile. 35 136 IPR004883 -
Ahy3g0192 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 206 - -
Ahy3g0192 209 MobiDBLite consensus disorder prediction 1 23 - -
Ahy3g0192 209 Pfam Lateral organ boundaries (LOB) domain 36 133 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0192 Ahy-Chr3 2128088 2130748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0192 32 209 AS2 family AT1G07900 61.878 1.29e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy3g0192 LOB 3.30E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0192 - - tcc:18590099 257.684