Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0169 ATGCTAAGTAAGACTCTTTCTTTTGCCACTGCAATGGGCTGCTGTAATTGCTTCGGCTTCATAAGGAGTCAAAGCCGACAGAGAGCTAAGCCCCGCCATGTCAACCATAATCCCTCCCAGGAGCGGTTGTTGGATGATGACATGGATGACATGGATGACGATGATGAGCTGATGTATGGTGACAATGTTGCTAACTCCAGTAGTGGAGATGATAGCGATGGGCAAATTCGCCCCAAGCGATCTGAGGATATTTTGAACTTCAGAGCAGAGAATGACTTGGTTTGTAGGAAGTTTCCTGTTAAGGAGACTCACAAAGTTGTTCGATCAGAGGATGACAATGGGACCAAGATGATTAATCAGTATGTTCGTGAATATAAGATCGGTTCTGGTAGCTATGGGAAAGTGGCGCTTTATCGAAACTCCATTGATGGAAAGCATTATGCAATTAAGTCCTTTCACAAGTCTCATCTACTGAAGCTTCGAGTTGCACCCTCTGAGACAGCCATGTCTGATGTTCTACGTGAGGTACAAATTATGAAAATGCTAGGGCATCCTAATATAGTCAATCTTATTGAGGTGATTGATGATCCTGAGTCAGATCACTTCTACATGGTACTTGAATATGTGGAAGGCAAGTGGGTTTGTGAGGGTACAGGCCGTGCTTGTGCCTTAGGTGATGAGACTGCTAGGAGATACTTGCGAGATATAGTTTCTGGATTGTCATATCTCCATGCTCATAACATAGTACACGGGGATATTAAACCTGATAATCTGCTGATTACACGTCATGGAACAGTAAAAATAGGGGATTTCAGTGTCAGCCAGGCTGTTGAGGATGATAATGATGAGCTTCGCCGTTCACCTGGCACTCCCGTCTTTACAGCACCAGAATGTATTCTAGGCCTTACCTATCATGGCAAAGCAGCTGACACATGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCCTTCCTTGGGGACACACTTCAAGATACATATGACAGAATAGTCAATAATCCAATAATACTCCCAAATGATCTGAACCCACATGTAAAGAACCTAATAGAAGGTCTACTTTTGAAAGACCCAAAACTTAGGATGACTCTGAGTGATGTTGCGGCACATAGCTGGGTCGTTGGAGATGATGGGCCAATTCCTGAGTACCTATGTTGGTGCAGAAGGAAGCGCTTTGGTCAAGAAAGCAACGAAAACAATACTACTGACTAA 1239 0.4358 MLSKTLSFATAMGCCNCFGFIRSQSRQRAKPRHVNHNPSQERLLDDDMDDMDDDDELMYGDNVANSSSGDDSDGQIRPKRSEDILNFRAENDLVCRKFPVKETHKVVRSEDDNGTKMINQYVREYKIGSGSYGKVALYRNSIDGKHYAIKSFHKSHLLKLRVAPSETAMSDVLREVQIMKMLGHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGRACALGDETARRYLRDIVSGLSYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAVEDDNDELRRSPGTPVFTAPECILGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIILPNDLNPHVKNLIEGLLLKDPKLRMTLSDVAAHSWVVGDDGPIPEYLCWCRRKRFGQESNENNTTD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0169 412 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Ahy3g0169 412 ProSiteProfiles Protein kinase domain profile. 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0169 412 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 412 - -
Ahy3g0169 412 MobiDBLite consensus disorder prediction 27 51 - -
Ahy3g0169 412 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
Ahy3g0169 412 Gene3D Transferase(Phosphotransferase) domain 1 220 388 - -
Ahy3g0169 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Ahy3g0169 412 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 412 - -
Ahy3g0169 412 SMART serkin_6 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0169 412 CDD STKc_LKB1_CaMKK 127 382 - -
Ahy3g0169 412 SUPERFAMILY Protein kinase-like (PK-like) 117 394 IPR011009 -
Ahy3g0169 412 Pfam Protein kinase domain 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0169 Ahy-Chr3 1877156 1882142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0169 116 389 CBL-interacting serine-threonine protein kinases AT5G35410 32.847 7.87e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Ahy3g0169 Pkinase 3.00E-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0169 K00908 - gmx:100789178 632.484