Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0149 ATGAAGGAAGGTGAGAAGACCTTGGATCCGCAGCTATGGCATGCGTGTGCAGGTTCCATGGTTCAGATGCCTCAAGTGAACTCGAAAGTGTTCTACTTTCCACAAGGGCATGCAGAACACGCTCAAACCGCCATTGATCTCTCAACTCCTTCTTTGAGGGTTCCACCACTCATCCCTTGCAGGGTTGCAACAGTGAGATTCATGGCTGACCCTGAAACAGATGAAGTTTTCGCAAAGATAAAGCTTGTTCCACTGAAAAGTTCAGAGCTTGATCAAAACGACAACACCTTGGAGGGTGAAGTTGTTGTGGAGAATCAAGAAAAGCCTGCATCTTTTGCAAAGACTTTGACCCAATCTGATGCTAACAATGGTGGGGGTTTCTCAGTCCCTCGTTACTGTGCAGAAACCATCTTCCCCCGGCTCGATTACTCGGCGGAGCCGCCGGTTCAGACGGTGGTGGCAAAGGATGTTCATGGTGAGCTATGGAAGTTTAGGCATATATATAGAGGTACACCAAGGAGGCACTTGCTTACAACTGGTTGGAGCACTTTTGTTAATCAGAAGAAGCTTGTAGCTGGGGATTCTGTGGTGTTTCTGAGGGCTGAAAATGGTGATCTTTGTGTTGGGATTAGGAGGGCAAAAAGGGGAATTGGAATTGGAATTGGTGGTGGTTGTGAGGGTTCATCTTTGTGGAGTTCAGCTTCTTCTGGTAATGGTAATAGTAATGGAGGGCCTTATGGAGCATTATCAATGTTCTTGAGAGAGGAGAACAACAAGCTTTTAAGGAATAGTAACGGAAGGTGTTCTTATTCTTCTTCTTCAAGGGTGAGAGCTGAAGATGTTGTGGAAGCTGTGTCAATGGCTGCAAGGAACCAAGCATTTGAGGTTGTGTATTCTCCAAGGGCAAGCACTCCTGAGTTCTGCATTAAGGCTTCTTCTGTGACTGATGCAATGAGGATCCAATGGTGTTCTGGCATGAGGTTCAAGATGCCCTTTGAGACTGAGGATTCTTCTAGGATCAGCTGGTTCATGGGGACTGTTGCTTCCGTTCAGGTTGCTGATCCTATCCGCTGGCCGAATTCGCCTTGGCGAATTCTTCAGGTTACTTGGGATGAGCCTGATTTGCTACAAAATGTGAAGAGAGTTAGTCCATGGTTGGTTGAATTGGTATCAAACATGCCAATCATCAATATCTCGCCATTCTCGCCACCAAGGAAGAAGTTGAGGTTTCCTCAGCACCCAGACTTCCCTCAGGACATTCAGTTCACATCATTACCAACGTTTCCGGGCAATTATATCGGGCCGAATAGCCCCATGTATTGTTTATCTGAAAACGCTCCCGCAAGCATACAGGGAACCAGGCATGCTCAAATTGGAATATCTCTTTCAGATTTCCACCTCAGCAATAAACTGCAGTTGGGGCTGCTTCCAACTAGTATCCATCGGCTCGATGTTCATAATCGCGACATGACCAACCATGATAAGAGCAAAGAGAGCTTATCATGCTTGCTCACCATGGGAAAATCCAACAAGAGTCTGGAGAGTTCTGATAACAATGTTAAGACACACCAGTTTTTGCTTTTTGGTCAGCCTATTCTCACTGAGCAACAAATCTCTCGAACCGGAAAAGACTCGCCGGACGAGACTAAGATCAAAGAGAAGTGCTTCTTAGGTGAAGCTAAATTTGCAGTTTCACAGCACATTCCACCAGGAAAAGCTTCTAATGCTGCCGAGTTTTCGTGGCAAATCGGCTTGGAAACTAGCCATTGCAAGGTTTTCTTGGAATCAGAAGATGTAGGAAGAACCTTAGACCTATCAAGCCTTGGTTCATATGAAGAACTCTATAGAAAACTGGCCAACATGTTTGATATGGAACGATCTGAGATCTTCAACCATGTTCTTTACCGCGACGAAACAAGTGCTGTTAAGAAAATTGGAGAAGAACCCTTCAGTGAATTCATGAAGACAGCAAAAAGATTGACAATTCTTATGGATTCAAGCAGCAAAAATATTACAAGGGCATGGATTACAGGGAGTCGCAGTGGTGAACATGGAATTGATGCATCAAACAAAACTGGTCCTCTTAGCATATTTGTTTAA 2100 0.449 MKEGEKTLDPQLWHACAGSMVQMPQVNSKVFYFPQGHAEHAQTAIDLSTPSLRVPPLIPCRVATVRFMADPETDEVFAKIKLVPLKSSELDQNDNTLEGEVVVENQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVVAKDVHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKRGIGIGIGGGCEGSSLWSSASSGNGNSNGGPYGALSMFLREENNKLLRNSNGRCSYSSSSRVRAEDVVEAVSMAARNQAFEVVYSPRASTPEFCIKASSVTDAMRIQWCSGMRFKMPFETEDSSRISWFMGTVASVQVADPIRWPNSPWRILQVTWDEPDLLQNVKRVSPWLVELVSNMPIINISPFSPPRKKLRFPQHPDFPQDIQFTSLPTFPGNYIGPNSPMYCLSENAPASIQGTRHAQIGISLSDFHLSNKLQLGLLPTSIHRLDVHNRDMTNHDKSKESLSCLLTMGKSNKSLESSDNNVKTHQFLLFGQPILTEQQISRTGKDSPDETKIKEKCFLGEAKFAVSQHIPPGKASNAAEFSWQIGLETSHCKVFLESEDVGRTLDLSSLGSYEELYRKLANMFDMERSEIFNHVLYRDETSAVKKIGEEPFSEFMKTAKRLTILMDSSSKNITRAWITGSRSGEHGIDASNKTGPLSIFV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0149 699 Pfam Auxin response factor 284 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy3g0149 699 Pfam B3 DNA binding domain 112 213 IPR003340 GO:0003677
Ahy3g0149 699 PANTHER AUXIN RESPONSE FACTOR 2 676 - -
Ahy3g0149 699 Gene3D - 321 394 - -
Ahy3g0149 699 SUPERFAMILY DNA-binding pseudobarrel domain 97 214 IPR015300 -
Ahy3g0149 699 CDD B3_DNA 111 212 IPR003340 GO:0003677
Ahy3g0149 699 SMART B3_2 112 214 IPR003340 GO:0003677
Ahy3g0149 699 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 676 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy3g0149 699 ProSiteProfiles PB1 domain profile. 587 670 IPR000270 GO:0005515
Ahy3g0149 699 Gene3D - 585 672 - -
Ahy3g0149 699 Gene3D - 110 214 IPR015300 -
Ahy3g0149 699 ProSiteProfiles B3 DNA-binding domain profile. 112 214 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0149 Ahy-Chr3 1610888 1614678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0149 3 673 B3 DNA Binding Superfamily AT2G28350 58.557 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy3g0149 B3 1.40E-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0149 - - gmx:100814686 986.482