Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0148 ATGTTTATTTTGCATATTTTTTCCCCAAAGAAAGAGGATATAGTTGAAGTATATACTGCTAATATGAAGGATTGTTGGTTTTTGGACAACAATTTGAATGGGGTATCGGATGAAGTTTTTGATGTGGTGGGGTTTTTTGATTTCCCAATAGAAGATGTGGAAGATGATGCTGTGGAGGAGGATTGGGGTGCTCAGTTTAAACAACTTGAAGAGCCATCTCTTGGTGTGTTTTCGGTATCACCATCCGGGCTGAGTGATAAAACTGAGAATGAGAATCCGAAACTTGGGAGGAGTATCTCTACTCCTGTGGCCGATCCTGCTCGGCCTACATACGGCAATACTATTCGGAACCAGAATGTTTCTTTTAATGGGAAAAGGGTGCCCAAGTTCCAAACCTACAGCCCTGTGTCTGTCTTTGAAAGCAGTAGTTCCTCCTCGGTCGAGAACTCCAACTTTGATCTACCTGTCATCCCGGTAAAGCGTCCTCGAGGCAAACGCCGGCCTCTCTCAAGCTTCAGCTTGCTATTATCTGTTCCATTCGTCTCTAACTCCCCAAAAGGTGAGGCAAATGATTTCTCTGGATCAAATTTACAAACACAAGCTGATGGTAAATTAATAAGCAGTCTCAAAAAGAAGCAGAGGAGTAAGGATCTACCTTTGCTTTCAGATCATACTGAGAAGAAGGGATCTGCATTGCAAGGGTCAGTTACCCACCGAAAATGCATGCATTGTGAGGTGACATCGACGCCGCAGTGGAGAGAAGGACCCATGGGTCCAAAGACACTTTGCAATGCTTGTGGGGTTCGGTATAGGTCCGGCCGGCTCTTCCCTGAATACCGGCCTGCAGCTAGCCCTACGTTTGTACCATCATTGCACTCGAACTCTCACCGGAAGGTCATCGAAATGAGGAGCCGAACTGCGACAGAGACTCTTAAGGGTTCTTCTATGTTGGACAAAGTGTTGTGA 966 0.4565 MFILHIFSPKKEDIVEVYTANMKDCWFLDNNLNGVSDEVFDVVGFFDFPIEDVEDDAVEEDWGAQFKQLEEPSLGVFSVSPSGLSDKTENENPKLGRSISTPVADPARPTYGNTIRNQNVSFNGKRVPKFQTYSPVSVFESSSSSSVENSNFDLPVIPVKRPRGKRRPLSSFSLLLSVPFVSNSPKGEANDFSGSNLQTQADGKLISSLKKKQRSKDLPLLSDHTEKKGSALQGSVTHRKCMHCEVTSTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHRKVIEMRSRTATETLKGSSMLDKVL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0148 321 MobiDBLite consensus disorder prediction 77 118 - -
Ahy3g0148 321 PANTHER GATA TRANSCRIPTION FACTOR 42 305 - -
Ahy3g0148 321 Gene3D - 234 285 IPR013088 GO:0006355|GO:0008270
Ahy3g0148 321 Pfam GATA zinc finger 241 274 IPR000679 GO:0006355|GO:0043565
Ahy3g0148 321 SMART GATA_3 235 285 IPR000679 GO:0006355|GO:0043565
Ahy3g0148 321 CDD ZnF_GATA 240 287 IPR000679 GO:0006355|GO:0043565
Ahy3g0148 321 MobiDBLite consensus disorder prediction 208 234 - -
Ahy3g0148 321 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 238 298 - -
Ahy3g0148 321 MobiDBLite consensus disorder prediction 208 224 - -
Ahy3g0148 321 ProSiteProfiles GATA-type zinc finger domain profile. 235 271 IPR000679 GO:0006355|GO:0043565
Ahy3g0148 321 ProSitePatterns GATA-type zinc finger domain. 241 266 IPR000679 GO:0006355|GO:0043565
Ahy3g0148 321 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 42 305 - -
Ahy3g0148 321 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0148 Ahy-Chr3 1591672 1595295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0148 29 305 C2C2-Gata Transcription Factor Family AT1G08000 39.249 1.04e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy3g0148 GATA 7.80E-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0148 - - aprc:113853859 314.309