Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0139 ATGCCTCTGATTGAAACTTTGATTGAGAGAAGTTGTCACTTGAAAATGAGAATGGTGTTTGGGAATACAAGATGTGTGAGATTTCAAGATGATGCTGAACTGGCCAAAATCCCAACAACTAATGGTGACAATGGAATTAAGCTACTTAGTTCCAATAAAGATCACAACAATAGAAAAGCAAGAAAAGCAAAGAAGTTCTTGAAAGCCAGAGTATTATCAAGAGTTTTCTCAGAAGACTATGAGAGAGTAAGAAGAAGGATTCTAGACCCAAGAGGACAAACCATTCACAGATGGAACAAGATTTTCTTGGTAGCATGTTTAGTTTCTTTGTTTGTGGACCCTCTATTCTTTTACTTGCCACTAGTTCAACATCAAGTGTGCATTGGTATTGGAACAACACTTGAAGTGATCCTCACTATTATCAGATCAATAGCAGATTTATTCTACATGATTCAGATCATCATGAGGTATTGCACGGCTTATGTTGCGCCTTCTTCGCGTGTTTTCGGTAGAGGAGAGCTTGTTATAGACCCTGCAAAGATAGCAGCTAGGTACTTCTTCAAAGGTTTCTGGCTAGACTTTGTTGCCGCTTTACCCCTTCCTCAAGTGCTGATCTGGATTGTGATCCCCAATCTTGGAGGCTCAACCATGGCGAACACGAAAAACGTCCTTCGATTCATCATCATTTTTCAATATATACCAAGGCTGTTTCTGATTTTTCCACTTTCGTCCCAAATTGTAAAGGCTACTGGGGTTGTGACAGAGACAGCATGGGCTGGTGCTGCTTATAACCTTATGCTTTACATGCTGGCTAGCCATTTTTTTGGAGCTTGCTGGTACCTTCTATCAATTGAAAGACAAGAAGCATGCTGGAGGAGAGTCTGTGATATGAAAAATTCATCTTGTAAATATAGTTTCTTCGACTGCAACATGGTTAAAAATCCACTCAGGGACTCATGGTTTAAGGGAAGTAATGTCACAAAGTTATGTTCACCAGAAGCTAAGTTTTATCCTTTTGGCATATATGGTGATGCAGTCACATCAAGAGTTACAACCTCACCATTCTTTAAGAAGTATTTCTATTGTCTTTGGTGGGGTCTCAGGAATTTGAGTTCTTTAGGACAAAATCTACTCACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTCTGGTTGCAACCCTTGGATTGGTTCTTTTTGCATTACTCATTGGTAATATGCAGACATACCTTCAATCAACAACTGTGAGGCTAGAAGAGTGGAGGGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTTCCTCAAGAACTAAGACAATCCGTGCGCAAATACGATCAGTATAAATGGCTGGCGACTCGAGGAGTGGACGAAGAAGCCCTTCTCAAAGATCTTCCATTAGATCTTCGAAGAGACATCAAGCGCCATCTTTGTATCGAGCTGGTTCGACGAGTTCCATTGTTTGAACAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTAAAGCCTTCATTGTGCACAGAAAGCACATATCTTGTCCGAGAAGGCGATCCGGTCAACGAAATGCTCTTCATAATCAGAGGAAATCTTGATTCCTACACAACCAATGGCGGCCGGACCGGATTCTTCAACTCGTGCCGGATCGGCCCTGGCGATTTCTGCGGCGAGGAACTCCTAACTTGGGCCTTAGATCCAAAACCAAGTGTGATAATACTTCCTTGTTCCACAAGAACAGTTAAGGCCATATCAGAAGTTGAAGCATTTGCACTCATGGCAGAAGATTTGAAATTTGTTGCATCACAATTTAGAAGATTGCATAGCAAGCAACTTAGGCACAAGTTCAGGATTCACTCACACCAATGGAGAACTTGGGCTGCATGTTTCATACAAGCTGCATGGAGAAGGTTCAAGAAGAGAAAAGAAGCTGCTGAATTGAGGGCAAGAGAAGAAAATGAGGCTGAAACACATGCAACAAGGAGCAATAGGAAGGGTATGGATGTAAATTCAGGTGCAGATTCTGAAGTAGTAAGCTCTTTGCAGAAGCCAGCTGAACCAGACTTTTCTGTTGATGAGTGA 2091 0.4151 MPLIETLIERSCHLKMRMVFGNTRCVRFQDDAELAKIPTTNGDNGIKLLSSNKDHNNRKARKAKKFLKARVLSRVFSEDYERVRRRILDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVQHQVCIGIGTTLEVILTIIRSIADLFYMIQIIMRYCTAYVAPSSRVFGRGELVIDPAKIAARYFFKGFWLDFVAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIIIFQYIPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHFFGACWYLLSIERQEACWRRVCDMKNSSCKYSFFDCNMVKNPLRDSWFKGSNVTKLCSPEAKFYPFGIYGDAVTSRVTTSPFFKKYFYCLWWGLRNLSSLGQNLLTSTFVGEIMFAILVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWLATRGVDEEALLKDLPLDLRRDIKRHLCIELVRRVPLFEQMDERMLDAICERLKPSLCTESTYLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPKPSVIILPCSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRIHSHQWRTWAACFIQAAWRRFKKRKEAAELRAREENEAETHATRSNRKGMDVNSGADSEVVSSLQKPAEPDFSVDE* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0139 696 PANTHER - 28 661 - -
Ahy3g0139 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 661 - -
Ahy3g0139 696 SMART cnmp_10 490 622 IPR000595 -
Ahy3g0139 696 MobiDBLite consensus disorder prediction 651 696 - -
Ahy3g0139 696 ProSiteProfiles cAMP/cGMP binding motif profile. 490 576 IPR000595 -
Ahy3g0139 696 SUPERFAMILY cAMP-binding domain-like 420 619 IPR018490 -
Ahy3g0139 696 MobiDBLite consensus disorder prediction 651 666 - -
Ahy3g0139 696 SUPERFAMILY Voltage-gated potassium channels 89 412 - -
Ahy3g0139 696 Gene3D Helix hairpin bin 417 481 - -
Ahy3g0139 696 MobiDBLite consensus disorder prediction 667 681 - -
Ahy3g0139 696 Gene3D Jelly Rolls 488 609 IPR014710 -
Ahy3g0139 696 CDD CAP_ED 490 622 IPR000595 -
Ahy3g0139 696 PRINTS EAG/ELK/ERG potassium channel family signature 453 460 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy3g0139 696 PRINTS EAG/ELK/ERG potassium channel family signature 270 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy3g0139 696 PRINTS EAG/ELK/ERG potassium channel family signature 403 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy3g0139 696 PRINTS EAG/ELK/ERG potassium channel family signature 359 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy3g0139 696 PRINTS EAG/ELK/ERG potassium channel family signature 153 162 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy3g0139 696 PRINTS EAG/ELK/ERG potassium channel family signature 385 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy3g0139 696 Gene3D - 99 414 - -
Ahy3g0139 696 Pfam Ion transport protein 98 417 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0139 Ahy-Chr3 1517814 1522171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0139 65 695 Ion Channels AT2G28260 75.981 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0139 K05391 - gmx:100791992 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0501 18 4620267 4623757 Ahy3g0139 3 1517814 1522171 PCT
Ahy8g1307 8 28917547 28921172 Ahy3g0139 3 1517814 1522171 PCT
Ahy3g0139 3 1517814 1522171 Ahy18g0501 18 4620267 4623757 PCT
Ahy3g0139 3 1517814 1522171 Ahy8g1307 8 28917547 28921172 PCT