Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0123 ATGATGAACATAGAGATATTAGGGAAGAAGGTTAACTTTGTTACAATTGTTGTTGTATTGAGCTGCATTGTGGGGCCAGCGTCTTCTCAAACAGCCCCCGGCGGTGGCGCCGCGGCCGGCGGCGGCACCGGCCTCCCCAATGAAGCTGCAGTTCAGTTATTTGCACAGGAAATGTACAAAAGCATGGGTAGTTACACCAACGTCTTCAAGGATTCAATCAGGAAACATTTGGGATTTTGCATTGTGGATGCGGACCGAGATTGGGATGGTGCCTTCAATTTCTCCAGTGATCTCTCTTTTCTGACCAACTGTGCCAAAAATTTACAAGGAGATATTACACAGCGCATGTGCATAGGTTCAGAGCTTGAAATGTATTCATCACTGGTTAAAAGCAACAAAAGGTTTGTTAACCCGAATGTGAACTGCAATACGAGCACGTGGCTAAATGGGTGTGAGCCTGGATGGGCATGTAAGGCTAATGAGAAAGTAGAGCTTAACAGCACCCAGAAGGACATACCTGTTAGAAATTCAGATTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCCTGGTCTTACTTGCATGATACCTTGTCCATTGGGAGCTTATTGTCCACGTGGAACTCTGAACGCAACAAGTGGAGTATGTCAACCATATCGTTATCAGATACCTCCTGGAAAGTTAACCCATTCTTGTGGGGGAGCAGATATTTGGGCTGATATTAGAAGCAGTGCAGAGGTTTTTTGTGCTCCAGGAGCATTCTGTCCATCTAATATCATAAAAAATGATTGCAATAAGGGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGAGATGTTTCACTTTGGCAACATGTGAACCTAAATCAGAAAACCAGAATATTACTGCATATGGTGTCCTGGTCTTTGCTGGAGTGTGTTTCATGCTTATTATCATATATAACTGCTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCGAAATCAAGAGAAAGGGCTGCAGCACACGTGAGAGAAACACAAGCACGAGAAAAATGGAAATCAGCAAAAGACATAGCCAAGAAGCACGCAGTAGGTCTGCAATCGAGTTTGTCACGAACATTTTCACGCCAAAAGACTAACAAGGGATCAGGAACCTTACCACCTTCTGCCCCTGCAAAAGCAAAGAAAAAGGACAAGAGCAACCTCAGCAAGATAATAAGTGACATTGAGGAAGATCCTGATAGCCAAGAAGGTTTTAATATTCAGATAGGGGATAAGAATGTTAAGAAGCAAGCACCAAAGGGTAAGCAATTGCATACTCAGAGTCAAGTGTTCAAGTATGCATATAATCAGATTGAGAAAGAGAAGGCCTTACAGGAACAAATGAAGAACATGACCTTCTCTGGAGTTATCTCAATGGCTAATGAGATTGAGATAAGGAAAAGGCCTACCATTGAGGTTGCATTTAAAGATTTAACACTCACTTTGAAAGGAAAAAACAAACACCTATTAAGAAGTGTGACAGGTAAATTGTTTCCCGGCCGGGTTTCAGCAGTTATGGGACCATCTGGGGCCGGCAAGACAACATTTCTTTCTGCTTTGACTGGGAAAGCGGCTGGATGCACCACAACTGGTCAAGTTCTTGTAAACGGCCAGGAATCGCCAATTCGGTCGTACAAGAAAATCATTGGATTTGTGCCACAAGATGATATTGTTCATGGAAATTTGACAGTGGAGGAAAATCTGTGGTTCAGTGCCAGATGCAGGCTCGCGGCTGATCTACCAAAAGAGGAGAAAGTCTTGGTGGTTGAAAGAGTCATCGAGGCTCTGGGTTTGCAGGCAATTAGGGACTCTATGGTTGGTACGGTGGAGAAGAGAGGAATCTCCGGAGGACAGAGGAAAAGAGTAAATGTTGGACTCGAAATGGTGATGGAACCTTCACTTCTAATTTTAGATGAACCCACTTCTGGTTTGGACAGCTCATCATCTCAATTACTTCTTAGAGCTCTTAGACGTGAAGCCCTTGAAGGAGTTAACATATGTATGGTCCTTCACCAACCTAGTTACACATTGTTCAGGATGTTTGATGACTTTATATTGCTAGCTAAAGGAGGACTTACAGTGTATCATGGACCAGTGAACAAGGTGGAAGAGTACTTTTCTGGCTTGGGAATTGTTGTCCCTGACCGCGTCAACCCTCCGGATTACTACATTGACATTTTAGAAGGAATCATAAAGATACCAGCAGGGTCAGGAGTGAGCCAGAAACAACTACCTGTTAGATGGATGCTTCATAACGGCTACCCTGTGCCGATGGATATGCTTGAACTCATTGAAGGAATGTCTACTAACAATACTGGTTCACCAAGTGTAGCAGCTTCCACTCCAGATAACAATGCTGGTCCATCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGGCCAGTGTTGAGATGAAGAGGGACAATTTCAGTTATAAATTCTTGACTTCGCACGATTTGTCCAATAGGAAGACACCTGGATCATTCACCCAATACAAGTACTTTCTTGGGAGAGTTGGTAAGCAGCGGCTACGAGAAGCTAGATCACTTGCCGTGGACTTTATGATCTTGCTTCTAGCAGGACTTTGCCTAGGAACACTAGCCAAAATGAGTGATGAATCATTTGGAGCAACTGGTTATACATACACAGTAATAGCAGTATCACTCCTTTCGAAGATCGCGGCTTTGAGATCCTTCTCCTTGGATAAGTTGCACTATTGGAGGGAGAGTGCTTCTGGCATGAGCAGCCTTGCATATTTTCTTTCAAAGGACACAGTTGATCATTTCAGTACACTCATCAAACCTCTGATGTATCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCTTCTTTTCAAGCCAACTATGCTGTTCTGCTATGTTTGGTGTACTGTGTTACTGGCATAGCTTATGTGTTAGCAATCTTCCTTGAACCTGGTCCAGCCCAGCTGTGGTCTGCATTGCTTCCAGTAGTTTTGACACTCATCGCAACCTATGAAAATTCTGAGAATAATGGATTCATCCGCTTTGTGGCAGACATATGCTACGCAAGGTGGGCTCTTGAAGCATTTGTTATATCAAATGCCAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGTGGTGCACTCTATAAGAGTGGCTATGATCTCAACCGTTGGTATCAATGTTTAGGCCTTCTTGTAGCAACTGGAGTAATTAGTCGTGTGCTTGCATTCTTTTGTATGATAACATTCCAGAAGAAGTAG 3276 0.4325 MMNIEILGKKVNFVTIVVVLSCIVGPASSQTAPGGGAAAGGGTGLPNEAAVQLFAQEMYKSMGSYTNVFKDSIRKHLGFCIVDADRDWDGAFNFSSDLSFLTNCAKNLQGDITQRMCIGSELEMYSSLVKSNKRFVNPNVNCNTSTWLNGCEPGWACKANEKVELNSTQKDIPVRNSDCQPCCEGFFCPPGLTCMIPCPLGAYCPRGTLNATSGVCQPYRYQIPPGKLTHSCGGADIWADIRSSAEVFCAPGAFCPSNIIKNDCNKGYYCRTGSTAQERCFTLATCEPKSENQNITAYGVLVFAGVCFMLIIIYNCSDQVLATRERRQAKSRERAAAHVRETQAREKWKSAKDIAKKHAVGLQSSLSRTFSRQKTNKGSGTLPPSAPAKAKKKDKSNLSKIISDIEEDPDSQEGFNIQIGDKNVKKQAPKGKQLHTQSQVFKYAYNQIEKEKALQEQMKNMTFSGVISMANEIEIRKRPTIEVAFKDLTLTLKGKNKHLLRSVTGKLFPGRVSAVMGPSGAGKTTFLSALTGKAAGCTTTGQVLVNGQESPIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLAADLPKEEKVLVVERVIEALGLQAIRDSMVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSGLGIVVPDRVNPPDYYIDILEGIIKIPAGSGVSQKQLPVRWMLHNGYPVPMDMLELIEGMSTNNTGSPSVAASTPDNNAGPSFAGELWQDVKASVEMKRDNFSYKFLTSHDLSNRKTPGSFTQYKYFLGRVGKQRLREARSLAVDFMILLLAGLCLGTLAKMSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTLIKPLMYLSMFYFFNNPRSSFQANYAVLLCLVYCVTGIAYVLAIFLEPGPAQLWSALLPVVLTLIATYENSENNGFIRFVADICYARWALEAFVISNAKRYAGVWLISRCGALYKSGYDLNRWYQCLGLLVATGVISRVLAFFCMITFQKK* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0123 1091 SMART AAA_5 509 710 IPR003593 -
Ahy3g0123 1091 Pfam ABC transporter 500 652 IPR003439 GO:0005524
Ahy3g0123 1091 ProSitePatterns ABC transporters family signature. 624 638 IPR017871 GO:0005524
Ahy3g0123 1091 CDD ABCG_EPDR 481 707 - -
Ahy3g0123 1091 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 483 724 IPR003439 GO:0005524
Ahy3g0123 1091 Pfam ABC-2 type transporter 681 1091 IPR043926 GO:0140359
Ahy3g0123 1091 MobiDBLite consensus disorder prediction 362 382 - -
Ahy3g0123 1091 MobiDBLite consensus disorder prediction 359 397 - -
Ahy3g0123 1091 MobiDBLite consensus disorder prediction 332 351 - -
Ahy3g0123 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 717 IPR027417 -
Ahy3g0123 1091 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 1087 - -
Ahy3g0123 1091 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 47 1087 - -
Ahy3g0123 1091 Gene3D - 471 718 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0123 Ahy-Chr3 1325330 1332040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0123 510 703 Calmodulin-binding Proteins AT2G36910 29.703 8.81e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0123 - - gmx:100794093 1707.58