Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0107 ATGGTGTCGGACGCAAGCAAGAAGAAGGCTGCGCAGAAGAAGATCGCCGCCGCAGCTAAGAGAGGCGGCAAGGCTGCTGCTGCCGCGGTTGCTTCCAAGGTGGCGGCGGTTGACGCTCATAAGGCGGCTGTTAAGGTGGCGAATGAGATCGCCGACCTTCGTATATCGGATCGTACTTGTACTGGTGTCCTCTGCTCCCATCCTCTGTCCAGGGATATTCGGATAGAATCTCTATCGGTTACATTCCATGGACATGACCTAATAGTTGATTCTGAATTGGAGTTAAACTATGGAAGACGCTATGGTTTACTTGGATTAAATGGATGTGGAAAATCTACTTTGCTTACGGCAATAGGTTGCCGTGAACTTCCGATTCCTGAGCACATGGATATCTATCACCTTAGCAGGGAAATTGAAGCCACATATATGTCTGCATTGGAGGCAGTCATAAACTGTGACGAGGAAAGATTGAAGTTGGAAAAAGAAGCGGAAGCTTTGGCTGCTCAGGACGATGGTGGTGGTGAAACTCTTGAACGGATTTATGAACGATTAGAGGCCCTAGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATTTTACATGGTCTCGGTTTCAACAAGGAGATGCAAGCAAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGAATTGCACTAGCTCGAGCTCTATTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTTGATTTGGAAGCTTGTGTATGGCTTGAGGAGAGCTTGAAGAAGTTTGACCGTATACTGGTTGTGATTTCACACTCTCAGGACTTCCTTAATGGTGTCTGCACAAATATTATCCACATGCAAAACAAAAAACTAAAGCTTTACACCGGTAACTATGACCAGTATGTTCAGACTCGTTCTGAGTTGGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAAGAGCAGATTGCCTCAATGAAGGAATATATTGCTCGATTCGGCCACGGTTCGGCAAAACTAGCTCGCCAAGCACAAAGTAAAGAGAAAACACTGGCTAAAATGGAACGGGGTGGACTTACTGAGAGAGTGGTTAAAGACAAAGTCTTGGTGTTCCATTTTACTGATGTGGGAAAACTTCCCCCTCCTGTTCTTCAGTTTGTTGAGGTGACGTTTGGTTATACCCCTGATAATCTCATTTACAAGAATATCGACTTTGGCGTTGATTGTGACTCTAGGGTAGCCCTGGTTGGACCCAACGGTGCCGGAAAGAGTACACTACTGAAACTCATGACGGGTGACTTAATTCCCAATGATGGCATGGTCCGGCGTCACAACCATCTTCGAATTGCTCAATTTCACCAGCACTTGGCTGATAAGCTGGACATGGAGATGTCTGCACTCCAGTTTATGATGAAAGAGTACCCTGGAAATGAGGAAGAGAAGATGAGAGCAGCTATTGGGAAGTTTGGGCTGTCAGGTAAAGCTCAGATAATGCCTATGAAGAACTTGTCTGATGGGCAGAGGAGCCGTGTGATATTTGCATGGCTAGCCTGGAAGCAGCCTCATTTGCTACTCCTGGATGAGCCAACTAATCATTTGGATATCGAGACAATTGACTCATTGGCCGAGGCATTGAACGAATGGGATGGCGGCATGGTGCTCGTTAGCCATGACTTCAGGCTCATAAACCAGGTGGCCCATGAGATATGGGTGTGTGCAAATCAAACTATCACCAGATGGGATGGTGATATCATGGACTTCAAGATGCATCTCAAATCACAGGCAGGCTTATCTGACTGA 1800 0.4622 MVSDASKKKAAQKKIAAAAKRGGKAAAAAVASKVAAVDAHKAAVKVANEIADLRISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLSREIEATYMSALEAVINCDEERLKLEKEAEALAAQDDGGGETLERIYERLEALDAATAEKRAAEILHGLGFNKEMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTERVVKDKVLVFHFTDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDCDSRVALVGPNGAGKSTLLKLMTGDLIPNDGMVRRHNHLRIAQFHQHLADKLDMEMSALQFMMKEYPGNEEEKMRAAIGKFGLSGKAQIMPMKNLSDGQRSRVIFAWLAWKQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCANQTITRWDGDIMDFKMHLKSQAGLSD* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0107 599 Pfam ABC transporter 91 245 IPR003439 GO:0005524
Ahy3g0107 599 Pfam ABC transporter 400 531 IPR003439 GO:0005524
Ahy3g0107 599 Gene3D - 73 337 IPR027417 -
Ahy3g0107 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 313 IPR003439 GO:0005524
Ahy3g0107 599 SMART AAA_5 409 595 IPR003593 -
Ahy3g0107 599 SMART AAA_5 97 299 IPR003593 -
Ahy3g0107 599 CDD ABCF_EF-3 384 576 - -
Ahy3g0107 599 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524
Ahy3g0107 599 Gene3D - 349 597 IPR027417 -
Ahy3g0107 599 Coils Coil 291 311 - -
Ahy3g0107 599 PANTHER - 1 599 - -
Ahy3g0107 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 320 IPR027417 -
Ahy3g0107 599 CDD ABCF_EF-3 73 290 - -
Ahy3g0107 599 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 599 - -
Ahy3g0107 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 599 IPR003439 GO:0005524
Ahy3g0107 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 580 IPR027417 -
Ahy3g0107 599 Coils Coil 149 169 - -
Ahy3g0107 599 Pfam ABC transporter 284 357 IPR032781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0107 Ahy-Chr3 1094478 1098799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0107 204 271 Calmodulin-binding Proteins AT2G36910 41.429 6.25e-08 53.9