Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0105 ATGCAGCGATCCGGTTACGGCGCCGACGGAATATATAGGTCCTTGAGACCTTCCTTTTCCCTTCCCAAAACCACCACCTCCCTCACCTCCTTCCTCTTCCAAAACACCACCGCCACCTCTTCCTCCGCTTCCAAAACCGCCCTCATCGACGCCGACACCTCCGAAACACTCACCTTCCGCCAACTCAAAACCACCGTCGCCAAGCTCTCCCACGCCCTCCTCCGCCTCGGCCTCAAAAAACACGACGTCCTCCTCATCCTCGCCCCAAACTCCATCCACTTCCCTATCTTGTTCCTCGCCGCCACCGCCATCGGCGCCGTCGTGACCACCGCGAACCCTCTTTACACCGTCACGGAGCTCTCCAAACAAATCAACAACTCCAACCCGAAGCTCGTGGTCACAGTTGCAGAATTATACGAGAAAGTCAGATCCTTCAAGTTCGAATTGCCCGCAGTGTTAATCGGTTCCGAAACGACACCAGAAACAATCAATTATAGTCGTTTAATGGAAGAAGTGGCAGGTGAGAATGAGTTACCAGTAAACGACGTGAATGAAGACGATACGGCAGCGCTTTTGTATTCTTCGGGAACGACGGGAGTGAGCAAGGGCGTGATTCTGACGCACGGGAATTTCATAGCGGCTGCGTTGATGATTGGAATGGACGACGATTACGTGGACGAACTTGAGGGAGTAAACGACAGCGTGTACCTCTGCGTTTTACCGATGTTCCACGTATTCGGGTTGGCAGTTATCCTGTACGCGCAGCTTAGAAGAGGGAGCACGGTGGTGTCCATGAGGAGATTCGAGTTGGAGAAGTTTCTAGAAGGCATTGAGAAGCACAAGGTGACGAACCTTTGGGTTGTGCCTCCGATCCTGCTTGCGATGGCCAAGCACAGCGTTGTGGATAAGTATGACGTGTCATCGTTGAGAAGGATTGGTTCCGGTGCTGCTCCTCTTGGCAAGGACTTGATGCAAGATTGTGCCAACCGTTTTCCTCATGCTGCTCTCATTCAGGGGTATGGAATGACAGAAACTTGTGGCATTATTTCTGTGGAGAATCCAAGAGCAGGGGTTCGTCATAGTGGTTCAACTGGAATGCTAGTTTCTGGAGTGGAAGCTCAAATCATGAGTGTTGATACGAACAAGCCCCTTCCCCCTAAACAATTGGGTGAGATTTGGGTACGGGGTCCAAATATGATGAAAGGTTATTTTAAGAATCCAGAGGCTACAAGATCAACTATAGATAGCAAAGGGTGGGTACATACCGGAGATCTTGGATATTTTGATGAGGAGGGTCAACTTTATGTTGTTGACCGTCTCAAAGAACTCATCAAGTATAAAGGTCTTCAGGTTGCACCAGCAGAACTTGAAGGACTTCTCGTTTCTCACCCTCAAATATTAGATGCTGTTGTCATCCCATATCCGGATGATGAAGCTGGTGAGGTTCCAATTGCCTTTGTTGTTCGTTCACCCAACACTTCACTCACTGAACAAGAGGTTCAGAAGTTTATTGCTAATCAGGTTGCACCATTCAAAAGATTGCGAAGGGTGACATTCATCAACAGTGTTCCTAAGACAGCTTCCGGAAAAATACTCAGAAGAGACCTCATAGCAAAAGTACGATCCAAAATATAG 1635 0.4893 MQRSGYGADGIYRSLRPSFSLPKTTTSLTSFLFQNTTATSSSASKTALIDADTSETLTFRQLKTTVAKLSHALLRLGLKKHDVLLILAPNSIHFPILFLAATAIGAVVTTANPLYTVTELSKQINNSNPKLVVTVAELYEKVRSFKFELPAVLIGSETTPETINYSRLMEEVAGENELPVNDVNEDDTAALLYSSGTTGVSKGVILTHGNFIAAALMIGMDDDYVDELEGVNDSVYLCVLPMFHVFGLAVILYAQLRRGSTVVSMRRFELEKFLEGIEKHKVTNLWVVPPILLAMAKHSVVDKYDVSSLRRIGSGAAPLGKDLMQDCANRFPHAALIQGYGMTETCGIISVENPRAGVRHSGSTGMLVSGVEAQIMSVDTNKPLPPKQLGEIWVRGPNMMKGYFKNPEATRSTIDSKGWVHTGDLGYFDEEGQLYVVDRLKELIKYKGLQVAPAELEGLLVSHPQILDAVVIPYPDDEAGEVPIAFVVRSPNTSLTEQEVQKFIANQVAPFKRLRRVTFINSVPKTASGKILRRDLIAKVRSKI* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0105 544 Pfam AMP-binding enzyme 42 446 IPR000873 -
Ahy3g0105 544 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Ahy3g0105 544 Gene3D - 442 543 IPR045851 -
Ahy3g0105 544 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 543 - -
Ahy3g0105 544 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Ahy3g0105 544 Gene3D - 9 441 IPR042099 -
Ahy3g0105 544 CDD 4CL 25 536 - -
Ahy3g0105 544 SUPERFAMILY Acetyl-CoA synthetase-like 28 542 - -
Ahy3g0105 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0105 Ahy-Chr3 1078786 1082338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0105 1 544 Monolignol Biosynthesis Gene Families AT4G05160 64.919 0.0 746