Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0103 ATGGGAAGAGCTCCATGTTGTGACAAGGCAAATGTGAAGAGAGGACCATGGTCACCTGAAGAAGACTTAAAGCTCAAAGAATACATACACAAGCATGGCACTGGTGGCAATTGGATTGCTCTTCCTCAAAAAGCTGGTCTCAAGAGATGTGGGAAGAGTTGCAGACTGAGATGGCTTAACTATCTGAGGCCAAACATTAAGCATGGAGAATTTTCTGAAGAGGAAGACAGAATCATTTGCAGCCTCTATGTTAACATTGGAAGCAGATGGTCAATTATAGCAGCTCAGTTGCCAGGAAGGACTGACAATGATATAAAGAATTATTGGAACACTAAGCTCAAGAAAAAACTCATCTCTGGTTTCATTCCCAATTCTTCTTCTATTCAACAAAGAAAACATCATCAACAACAACAACAACAACCTCCATTTCCATCATCATCAATGTACATGGATCAATGTTATGGATCTTATGTTACAGGCCTTGTTGATCCTATTTCACTTCCTTCAACTGAATACTATGCAAACACAACAACAACCTCAGTTCCATTTTACCAGCACCAAGTAGATTCCATTGTTAGCCCCAGCAGCATGCAACAAAATTATCACATGTTTGGAAGTGAAGGTAGTTGCAGTTCCTCTGATAATGGAAGCAGTATCAAGCAAGAGGAAATTGGGTATCATCATCAAGGATCATACAACAACATTATTGCATTTGATGAGTTCAACAACAACAACAATGATCATCATCATAATAATAAGTTTCTTCTTATGCCTAGTAGTTTCAATGATAATAGTAATAGCATTGTTAATTATGATGGTGGTGACAATATTACTGAATATGATCTTGAGGAAATTAAGCAATTGATTAGTGTTAGTAGTAGTGTTGATGAAATCAAGGAGGAGAAACCTATTTACTATTATTATTGA 927 0.37 MGRAPCCDKANVKRGPWSPEEDLKLKEYIHKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSEEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLISGFIPNSSSIQQRKHHQQQQQQPPFPSSSMYMDQCYGSYVTGLVDPISLPSTEYYANTTTTSVPFYQHQVDSIVSPSSMQQNYHMFGSEGSCSSSDNGSSIKQEEIGYHHQGSYNNIIAFDEFNNNNNDHHHNNKFLLMPSSFNDNSNSIVNYDGGDNITEYDLEEIKQLISVSSSVDEIKEEKPIYYYY* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0103 308 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Ahy3g0103 308 PANTHER TRANSCRIPTION FACTOR RAX3 1 295 - -
Ahy3g0103 308 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy3g0103 308 Gene3D - 69 142 - -
Ahy3g0103 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Ahy3g0103 308 SMART sant 13 64 IPR001005 -
Ahy3g0103 308 SMART sant 67 115 IPR001005 -
Ahy3g0103 308 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Ahy3g0103 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Ahy3g0103 308 CDD SANT 16 62 IPR001005 -
Ahy3g0103 308 Gene3D - 7 68 - -
Ahy3g0103 308 PANTHER OS09G0431300 PROTEIN 1 295 - -
Ahy3g0103 308 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Ahy3g0103 308 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0103 Ahy-Chr3 1006643 1008136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0103 1 118 MYB Transcription Factor Family AT5G57620 90.678 1.71e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g0103 Myb_DNA-binding 1.00E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0103 K09422 - gmx:100779919 311.612