Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0086 ATGGATTACAAGGAAGACTATTTCTCCAACACTAACAGTGATAATTGTAATGTTGTTCATCATGATGTTACCCATCATATAGCCAAGGGAAAACGGACCAAAAGGCTGAGGCTTTTGTGTGGCGGCACAACCGTCATGACGGCGGCGTCTAGCTGTTCTAGCGCTTCCGGGGATCATGGCAGCGGCGATGATCACGGCTCGTTTTCGATTTCTTCCACAACGAATCAAGAGGAAGAAGATATGGCTAATTGCTTGATTCTTCTTGCTCAAGGAGGAGGAGATTCTCATCAAAAACCGCCACAAATTGATGATCAAGATGAAGATGATAACAAGAAGATTATTGAAATCAAGAGTAGGAAATTCTCGGAGATTGAAACCGCCACCATAAACAACAACAAGGTTGGTTTCTATATTTATGAGTGCAAGACTTGTAACCGAACCTTTCCTTCCTTTCAAGCCTTGGGTGGTCATAGAGCGAGTCACAAGAAGCCTAAGCTCACAACAATCCCTGCCGCCGAGGACAAGAAACCACCACCACCGTCTCCGCCACCTCCACTGCCACCCCCACCACCGCAGCAACTTATGATGAACACCAATTATGACCATAGCCAGCAGATTGAAACTGTCCCTCCAAATAATAATAATCCAATAATTTCTCTACAGTTTGGGAGTGGGCAAAAAGGTCATTTCCACAACAACAAGCCCAACAAGATTCACGAGTGCTCCATATGTGGCTCCGAATTCACATCCGGCCAAGCACTGGGTGGACACATGAGAAGGCATAGGGCTACAGCGGCCGCAGCCGCCAATAATACTACTCAGGCCAATGTTGGCCTAAGCAGAATTGAGGCAACTTCTACTGTTATAACAACAACAGTAGAAGTTCAGCCTCGAAATATTCTAGAATTGGATCTCAACCTTCCGGCTCCGGAGGAAGACCTCCGGGAGCCAAAGTTTCAGTTTGCCACCGCGGCAACTAAGAAATCTATGGTGCTCTCAGCTGCTCCGGCTTTGGTGGACTGCCATTATTAG 1032 0.4671 MDYKEDYFSNTNSDNCNVVHHDVTHHIAKGKRTKRLRLLCGGTTVMTAASSCSSASGDHGSGDDHGSFSISSTTNQEEEDMANCLILLAQGGGDSHQKPPQIDDQDEDDNKKIIEIKSRKFSEIETATINNNKVGFYIYECKTCNRTFPSFQALGGHRASHKKPKLTTIPAAEDKKPPPPSPPPPLPPPPPQQLMMNTNYDHSQQIETVPPNNNNPIISLQFGSGQKGHFHNNKPNKIHECSICGSEFTSGQALGGHMRRHRATAAAAANNTTQANVGLSRIEATSTVITTTVEVQPRNILELDLNLPAPEEDLREPKFQFATAATKKSMVLSAAPALVDCHY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0086 343 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 21 343 - -
Ahy3g0086 343 MobiDBLite consensus disorder prediction 51 74 - -
Ahy3g0086 343 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 166 IPR013087 -
Ahy3g0086 343 PANTHER ZINC FINGER PROTEIN ZAT5 21 343 - -
Ahy3g0086 343 MobiDBLite consensus disorder prediction 90 110 - -
Ahy3g0086 343 SUPERFAMILY beta-beta-alpha zinc fingers 138 261 IPR036236 -
Ahy3g0086 343 Pfam C2H2-type zinc finger 139 164 - -
Ahy3g0086 343 Pfam C2H2-type zinc finger 239 263 - -
Ahy3g0086 343 ProSiteProfiles Zinc finger C2H2 type domain profile. 239 266 IPR013087 -
Ahy3g0086 343 ProSitePatterns Zinc finger C2H2 type domain signature. 241 261 IPR013087 -
Ahy3g0086 343 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Ahy3g0086 343 MobiDBLite consensus disorder prediction 173 194 - -
Ahy3g0086 343 Gene3D Classic Zinc Finger 137 261 - -
Ahy3g0086 343 SMART c2h2final6 239 261 IPR013087 -
Ahy3g0086 343 SMART c2h2final6 139 161 IPR013087 -
Ahy3g0086 343 MobiDBLite consensus disorder prediction 155 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0086 Ahy-Chr3 769446 770723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0086 26 343 C2H2 Transcription Factor Family AT2G28200 40.854 2.67e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy3g0086 zf-C2H2_6 2.80E-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0086 - - aip:107629278 559.681