Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0080 ATGGGTCAGATCCAGTACTCGGAGAAGTATTTCGATGACACTTACGAGTATAGGCATGTGGTGCTGCCTCCCGAAGTTGCTAAGCTGCTTCCAAAGAATCGACTTCTCTCTGAAAACGAGTGGCGTGCAATTGGTGTTCAACAGAGCCGTGGTTGGGTTCATTATGCGATTCACCGCCCCGAGCCACACATCATGCTTTTCAGGAGGCCATTGGATTATCAGCACCAGCAGGAAAGCCAGACCCAGCAAAGCATGCTCGTCAAGTGA 267 0.5056 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLDYQHQQESQTQQSMLVK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0080 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Ahy3g0080 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 85 - -
Ahy3g0080 88 SMART CKS_2 3 72 IPR000789 GO:0016538
Ahy3g0080 88 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Ahy3g0080 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Ahy3g0080 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 85 - -
Ahy3g0080 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Ahy3g0080 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Ahy3g0080 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Ahy3g0080 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Ahy3g0080 88 Gene3D - 1 84 IPR036858 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0080 Ahy-Chr3 747278 748620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0080 1 81 Core Cell Cycle Gene Families AT2G27970 86.420 1.64e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0080 K02219 - gmx:547737 174.481