Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0079 ATGGCGAACTGTGCGGATTCGGAGCAGTTCCTGGTGCTGTCTAGTATCCGGACGGGTCTCAAGAGAGAGTTTGCATTCGCCATGAAAGCTCAATCCGAGATCTGTGGGTCACTGGGCCGGACCAGGGCCTCCAAGAACGGGAATGCGGTTCAGGTCGTGAAAAGCCCGGTCAAAAAGCGGTCCAGGAAGTCAAGTTCGGGGGAAGGGAACAAGAGCGAGCCGAAAAGTGAGGACTTGAATTGTGGGGTGGTGAAAAGCGAAGATGGTGGTGGTAGAGGTGATGTTATGAGTGAAGAGGAGGCAAAGAGTGATGTTGTTGATGTGGAGGAACTAAAGAATGAAGGTGTTATGGTGGTGGTGGATGAAACGGAGAAGGTTGGTTGTGAAGGTGACGCAAAGGAGGGTGGTGAGGTATGTTGTTCTAAGGAAGATGGTGTTGTTGGTGGGGCAACACCTGTTTCAATTACAGGTGATAGTGGTGGTAGTTTGAAGGGTTCTGTTGTTTCTATGGAGAAGCCATTTAGGAGGTTTACTAGGTCTCTACTAAAGAGAAAGTTGGAAGATGATGTTAGTGGCGCAAAGGATGGGAATGATAAGGTAAATAACAATGCCGAAGCTGTTGAAGTTGGTGGTAATAATAAGAAGCGTGCTAATGATAGTGGCAAGGATGTTGAAGTTGGTGATGATGTCAAGGAGGAAATTGAAGATGGTGCATTGGTTGCTGTGTCCAAGGCTAGTACTAAGAGGTGCCCAACAAGTCTGAAGGAGCTTCTAGCCACGGGGATTCTTGAGGGTTTGGCAGTGAATTATGCTCGCAGTGTGAAGGCAATCAAGGCTGGAGAAGCAGAGCTTCGGGGAGTGATTAATGGCAATGGGATTGTGTGCCATTGTGAGGATTGCCATGGTGTTGAGGTTGTGACGCCCACCTTGTTTAAGCTTCATGCCAGTCGTTTAAACAAGTGCCCCCCAGAGTATATATACCTTGAGAATGGGAGTACTCTTCATGACATCATGAATACATGTTTGGATGTACCATTAGAAACCTTGGAAGAAGTTATCCAAAAAGTCATTGGAGGCTTCCCCATAAAGAAATCTACCTTTTGTTTTAACTGCAGAGATGCCAATGTTGTGTCGAGACTATTATGCAATTCATGCATGGAGTCGAAGGAATGCCAGCCTAACCTCCCCACTCAAACAACTGACACTAGCAATTGCAATGTTTTACATGCAGTTCAATCCAGGTCGCCAGAACCCATTGTGGTTCAAAAGTCAATAAACAATGGAATGAAGCACAGCACATCTCGTGATAAGAGTGACGGAAAAGTAACTAAGAAGGATCTACGCTTGCATAAGTTGATCTTTGAAGCAGATGTGTTGCCAGATGGAACAGAAGTAGCATACTATGTTCGCGGAAAGCGACTGTTGGATGGTTACAAGCAAGGTTTTGGAATAGTTTGTAGCTGCTGTGACAAAGAGATTAGTCCCTCCCAGTTTGAAGCTCATGCCGGTTGGGCATCACGTAGGAAACCTTACCTCCACATATACACATCTAATGGAGTCTCACTCCATGAGCTGTCCATCAATTATTTAAAAGAACGGAAGTTTTCCTCCAGTGATAATGATGACCTCTGCAGTATATGTTCTGATGGAGGGGATCTTTTGTGTTGCGATGGATGCCCAAGAGCATTTCACATTGATTGTGTTCCTCTCCCCTCTGTTCCAACTGATACCTGGTATTGTAAATACTGTGAGAATGTCTTTCAGAAAGACAAATATGTGGCGCATAATGCAAATGCGTTGGCGGCTGGAAGGATTGCAGGCATTGATCCTTTAGCACAGATACATGAAAGGTGTATTCGCATTGTTAAAACTCACCAGGTTCACCATGAGGGATGTGTACTGTGTAGGCAACCATATTTTAGCAAAATCTTTAGTCCCCGAACTATGATGATTTGTGATCAGTGTGAGAAGGAATATCATGTTGGGTGTATGAAGGATCATAACATACAAAATCTAGAGGCGTTGCCAGAAGGGAATTGGTTCTGCTGCTCAGAGTGCAATGGAGTTCATGCTGCTTTGGTAAATTTAGTGGCTGGTGAGGAAGAGAATCTTCCAGATTCCCTCCTTAGCTTGATTAAAAGAAAGCATGAAGAAAAAGGTTTAGAAACCAGGGCTGATCTTGATGTTAAATGGAAGGTTCTGAACTGGAATCTTATTGCTTCTGACAAGACCAGAAAATTGCTTTCGGAAGCTGTTGCTATCCTCCATGAGCGTTTCAGTCCTATAAATTCTGATTCGAGAGCCGATTTCATTCCAGCAATGATTTATGGGAGGAAAATTGGGGATTATGATTTTCGCGGAATGTACTGTGCAGTTCTCATTGTCAACCAAGTTATTGTATCTGTTGGAATATTTCGCATCTTCGGGCATGAAGTGGCAGAGCTTCCCTTAGTGGCGACGCCTACAGACTGCCAAGGACAGGGTTACTTCCAGTGCCTCTTTTCTTGCATTGAGAGGGTGCTTGCCTCTTTAAAAGTGAAACATTTAGTCCTACCAGCTGCGGAAGAAGCTGAATCAATATGGACCAATAAATTTGGGTTTACAAGGGTTGACCAAGATGAGATAAACGAATACAGGAGACGTCTCCGAATGATGATATTTCAGGAGACTCCCTTACTGCAGAAGCCGGTGTCTGCACTCGCAAGTACTTAG 2712 0.4458 MANCADSEQFLVLSSIRTGLKREFAFAMKAQSEICGSLGRTRASKNGNAVQVVKSPVKKRSRKSSSGEGNKSEPKSEDLNCGVVKSEDGGGRGDVMSEEEAKSDVVDVEELKNEGVMVVVDETEKVGCEGDAKEGGEVCCSKEDGVVGGATPVSITGDSGGSLKGSVVSMEKPFRRFTRSLLKRKLEDDVSGAKDGNDKVNNNAEAVEVGGNNKKRANDSGKDVEVGDDVKEEIEDGALVAVSKASTKRCPTSLKELLATGILEGLAVNYARSVKAIKAGEAELRGVINGNGIVCHCEDCHGVEVVTPTLFKLHASRLNKCPPEYIYLENGSTLHDIMNTCLDVPLETLEEVIQKVIGGFPIKKSTFCFNCRDANVVSRLLCNSCMESKECQPNLPTQTTDTSNCNVLHAVQSRSPEPIVVQKSINNGMKHSTSRDKSDGKVTKKDLRLHKLIFEADVLPDGTEVAYYVRGKRLLDGYKQGFGIVCSCCDKEISPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSINYLKERKFSSSDNDDLCSICSDGGDLLCCDGCPRAFHIDCVPLPSVPTDTWYCKYCENVFQKDKYVAHNANALAAGRIAGIDPLAQIHERCIRIVKTHQVHHEGCVLCRQPYFSKIFSPRTMMICDQCEKEYHVGCMKDHNIQNLEALPEGNWFCCSECNGVHAALVNLVAGEEENLPDSLLSLIKRKHEEKGLETRADLDVKWKVLNWNLIASDKTRKLLSEAVAILHERFSPINSDSRADFIPAMIYGRKIGDYDFRGMYCAVLIVNQVIVSVGIFRIFGHEVAELPLVATPTDCQGQGYFQCLFSCIERVLASLKVKHLVLPAAEEAESIWTNKFGFTRVDQDEINEYRRRLRMMIFQETPLLQKPVSALAST* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0079 903 MobiDBLite consensus disorder prediction 190 224 - -
Ahy3g0079 903 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 738 889 IPR000182 GO:0016407
Ahy3g0079 903 Pfam PHD-finger 544 585 IPR019787 -
Ahy3g0079 903 ProSitePatterns Zinc finger PHD-type signature. 544 583 IPR019786 -
Ahy3g0079 903 Pfam Tify domain binding domain 286 341 IPR032308 -
Ahy3g0079 903 Pfam Tify domain binding domain 477 526 IPR032308 -
Ahy3g0079 903 Gene3D - 733 895 - -
Ahy3g0079 903 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 529 606 IPR013083 -
Ahy3g0079 903 SUPERFAMILY FYVE/PHD zinc finger 527 585 IPR011011 -
Ahy3g0079 903 SMART PHD_3 631 687 IPR001965 -
Ahy3g0079 903 SMART PHD_3 543 584 IPR001965 -
Ahy3g0079 903 CDD PHD1_AIRE 543 583 - -
Ahy3g0079 903 PANTHER AUTOIMMUNE REGULATOR 1 896 - -
Ahy3g0079 903 MobiDBLite consensus disorder prediction 38 104 - -
Ahy3g0079 903 MobiDBLite consensus disorder prediction 61 82 - -
Ahy3g0079 903 ProSiteProfiles Zinc finger PHD-type profile. 541 586 IPR019787 -
Ahy3g0079 903 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 786 876 IPR016181 -
Ahy3g0079 903 PANTHER AUTOIMMUNE REGULATOR 1 896 - -
Ahy3g0079 903 SUPERFAMILY FYVE/PHD zinc finger 626 685 IPR011011 -
Ahy3g0079 903 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 627 688 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0079 Ahy-Chr3 741029 746941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0079 251 899 PHD Transcription Factor Family AT2G36720 40.195 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy3g0079 TDBD 2.10E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0079 - - lang:109351691 1054.66